FFCP PHASE1:Hg19::chrX:106960180..106960197,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1831 | |EntrezGene=1831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3051 | |HGNC=3051 | ||
|TSSclassifier=strong | |||
|UniProt=Q99576 | |UniProt=Q99576 | ||
|association_with_transcript=93bp_to_NM_004089,uc004eng.2_5end | |association_with_transcript=93bp_to_NM_004089,uc004eng.2_5end | ||
|cluster_id=chrX:106960180..106960197,- | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_2_at_TSC22D3_5end | |description=CAGE_peak_2_at_TSC22D3_5end | ||
|id=chrX:106960180..106960197,- | |id=chrX:106960180..106960197,- | ||
|ontology_enrichment_celltype=CL:0000738!4.72e-22!140;CL:0002057!1.90e-18!42;CL:0000766!9.01e-18!76;CL:0002087!1.16e-17!119;CL:0002031!1.31e-16!124;CL:0000860!7.50e-16!45;CL:0000557!2.91e-14!71;CL:0002009!1.31e-13!65;CL:0002194!3.62e-13!63;CL:0000576!3.62e-13!63;CL:0000040!3.62e-13!63;CL:0000559!3.62e-13!63;CL:0000839!3.93e-12!70;CL:0000037!7.20e-12!172;CL:0000566!7.20e-12!172;CL:0000988!3.00e-11!182;CL:0000134!6.42e-11!358;CL:0002320!7.59e-11!365;CL:0002032!4.94e-10!165;CL:0000837!4.94e-10!165;CL:0000048!3.22e-08!430;CL:0000136!1.44e-07!15;CL:0000723!2.05e-07!436;CL:0000034!2.50e-07!444;CL:0002393!5.45e-07!9;CL:0002397!5.45e-07!9;CL:0000791!5.71e-07!18;CL:0000789!5.71e-07!18;CL:0002420!5.71e-07!18;CL:0002419!5.71e-07!18;CL:0000790!5.71e-07!18;CL:0000094!9.07e-07!8 | |ontology_enrichment_celltype=CL:0000738!4.72e-22!140;CL:0002057!1.90e-18!42;CL:0000766!9.01e-18!76;CL:0002087!1.16e-17!119;CL:0002031!1.31e-16!124;CL:0000860!7.50e-16!45;CL:0000557!2.91e-14!71;CL:0002009!1.31e-13!65;CL:0002194!3.62e-13!63;CL:0000576!3.62e-13!63;CL:0000040!3.62e-13!63;CL:0000559!3.62e-13!63;CL:0000839!3.93e-12!70;CL:0000037!7.20e-12!172;CL:0000566!7.20e-12!172;CL:0000988!3.00e-11!182;CL:0000134!6.42e-11!358;CL:0002320!7.59e-11!365;CL:0002032!4.94e-10!165;CL:0000837!4.94e-10!165;CL:0000048!3.22e-08!430;CL:0000136!1.44e-07!15;CL:0000723!2.05e-07!436;CL:0000034!2.50e-07!444;CL:0002393!5.45e-07!9;CL:0002397!5.45e-07!9;CL:0000791!5.71e-07!18;CL:0000789!5.71e-07!18;CL:0002420!5.71e-07!18;CL:0002419!5.71e-07!18;CL:0000790!5.71e-07!18;CL:0000094!9.07e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-12;33!CL:0002057;2.19e-12;33!CL:0000576;1.28e-11;48!CL:0000473;1.20e-10;39!CL:0000234;1.20e-10;39!CL:0000766;4.57e-10;69!CL:0000136;1.09e-07;13!CL:0002087;3.52e-07;104!CL:0000791;4.23e-07;18!CL:0000789;4.23e-07;18!CL:0002419;4.23e-07;18!CL:0000094;6.15e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.46e-23,136;CL:0000766,6.54e-20,72;CL:0002087,2.17e-19,115;CL:0000860,6.37e-19,42;CL:0002057,6.37e-19,42;CL:0000473,1.43e-18,48;CL:0000234,1.43e-18,48;CL:0002031,6.69e-18,120;CL:0000557,4.16e-16,67;CL:0002009,8.63e-16,61;CL:0002194,2.47e-15,59;CL:0000576,2.47e-15,59;CL:0000040,2.47e-15,59;CL:0000559,2.47e-15,59;CL:0000839,7.89e-14,66;CL:0000037,3.01e-13,168;CL:0000988,2.03e-12,177;CL:0002032,2.20e-11,161;CL:0000837,2.20e-11,161;CL:0000134,8.38e-11,354;CL:0002320,1.00e-10,361;CL:0000048,5.99e-08,427;CL:0000136,9.75e-08,15;CL:0000763,1.83e-07,108;CL:0000049,1.83e-07,108;CL:0002393,3.83e-07,9;CL:0002397,3.83e-07,9;CL:0000791,4.01e-07,18;CL:0000789,4.01e-07,18;CL:0002420,4.01e-07,18;CL:0002419,4.01e-07,18;CL:0000790,4.01e-07,18;CL:0000723,4.84e-07,433;CL:0000094,6.46e-07,8;CL:0000034,6.59e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-14;42!CL:0000790;4.23e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.63e-19!115;UBERON:0002390!3.79e-17!102;UBERON:0003061!3.79e-17!102;UBERON:0002193!4.55e-16!112;UBERON:0002371!1.06e-12!80;UBERON:0003081!1.43e-11!216;UBERON:0001474!1.63e-11!86;UBERON:0002405!3.78e-11!115;UBERON:0002384!5.93e-10!375;UBERON:0004765!1.61e-08!101;UBERON:0001434!1.61e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.64e-19,114;UBERON:0002390,7.40e-19,98;UBERON:0003061,7.40e-19,98;UBERON:0002193,1.80e-17,108;UBERON:0002371,2.15e-14,76;UBERON:0003081,2.58e-14,203;UBERON:0002405,1.36e-13,93;UBERON:0001474,1.28e-12,82;UBERON:0004765,4.59e-10,90;UBERON:0002384,6.52e-10,371;UBERON:0001434,1.10e-08,100;UBERON:0000479,1.53e-08,773;UBERON:0000926,2.53e-08,315;UBERON:0004120,2.53e-08,315;UBERON:0006603,2.53e-08,315;UBERON:0002204,8.73e-07,167 | |||
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| ||
|short_description=p2@TSC22D3 | |short_description=p2@TSC22D3 | ||
}} | }} |
Latest revision as of 22:57, 18 September 2015
Short description: | p2@TSC22D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSC22D3_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 93bp_to_NM_004089, uc004eng.2_5end |
EntrezGene: | TSC22D3 |
HGNC: | 3051 |
UniProt: | Q99576 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.64e-19 | 114 |
hematopoietic system | 7.40e-19 | 98 |
blood island | 7.40e-19 | 98 |
hemolymphoid system | 1.80e-17 | 108 |
bone marrow | 2.15e-14 | 76 |
lateral plate mesoderm | 2.58e-14 | 203 |
immune system | 1.36e-13 | 93 |
bone element | 1.28e-12 | 82 |
skeletal element | 4.59e-10 | 90 |
connective tissue | 6.52e-10 | 371 |
skeletal system | 1.10e-08 | 100 |
tissue | 1.53e-08 | 773 |
mesoderm | 2.53e-08 | 315 |
mesoderm-derived structure | 2.53e-08 | 315 |
presumptive mesoderm | 2.53e-08 | 315 |
musculoskeletal system | 8.73e-07 | 167 |