FFCP PHASE1:Hg19::chr1:180166903..180166917,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200058 | |EntrezGene=200058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-226bp_to_NR_026900,uc001god.3_5end | |association_with_transcript=-226bp_to_NR_026900,uc001god.3_5end | ||
|cluster_id=chr1:180166903..180166917,+ | |||
|description=CAGE_peak_5_at_FLJ23867_5end | |description=CAGE_peak_5_at_FLJ23867_5end | ||
|id=chr1:180166903..180166917,+ | |id=chr1:180166903..180166917,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000222;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0002595;2.33e-15;5!CL:1000487;1.50e-10;2!CL:0002593;2.48e-10;2!CL:0002567;2.63e-07;3!CL:0002622;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.56e-19,1;CL:0002625,1.56e-19,1;CL:0000216,1.56e-19,1;CL:0002595,2.90e-15,5;CL:1000487,1.57e-10,2;CL:0002593,3.58e-10,2;CL:0002622,2.32e-07,3;CL:0002567,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.63e-07;3!DOID:127;2.63e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.05e-07,3;DOID:127,2.05e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0007195;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0003834;2.33e-15;5!UBERON:0001533;2.33e-15;5!UBERON:0003513;2.98e-11;7!UBERON:0004909;2.48e-10;2!UBERON:0002456;2.48e-10;2!UBERON:0003101;4.83e-08;22!UBERON:0000079;4.83e-08;22!UBERON:0002367;1.44e-07;11!UBERON:0010147;1.44e-07;11!UBERON:0003937;5.23e-07;12!UBERON:0005399;5.23e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.56e-19,1;UBERON:0001343,1.56e-19,1;UBERON:0004910,1.56e-19,1;UBERON:0005154,1.56e-19,1;UBERON:0005295,1.56e-19,1;UBERON:0004813,1.56e-19,1;UBERON:0005297,1.56e-19,1;UBERON:0005294,1.56e-19,1;UBERON:0010141,1.56e-19,1;UBERON:0005891,1.56e-19,1;UBERON:0007195,4.69e-19,1;UBERON:0003834,2.90e-15,5;UBERON:0001533,2.90e-15,5;UBERON:0004122,1.37e-11,15;UBERON:0003513,3.48e-11,7;UBERON:0004909,1.89e-10,2;UBERON:0002456,3.58e-10,2;UBERON:0003101,4.34e-08,22;UBERON:0000079,4.34e-08,22;UBERON:0002367,1.37e-07,11;UBERON:0010147,1.37e-07,11;UBERON:0009846,1.37e-07,11;UBERON:0003353,1.37e-07,11;UBERON:0004902,1.37e-07,11;UBERON:0003820,1.37e-07,11;UBERON:0009847,1.37e-07,11;UBERON:0003937,5.00e-07,12;UBERON:0005399,5.00e-07,12 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.276242966807689,0.114814448164607,0,1.57349297951309,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0,0,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0.808729926293264,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.409499734223957,2.12108147930569,0,0,1.32687795048244,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.987884678879706,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.276242966807689,0.114814448164607,0,1.57349297951309,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0,0,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0.808729926293264,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.409499734223957,2.12108147930569,0,0,1.32687795048244,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.987884678879706,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@FLJ23867 | |short_description=p5@FLJ23867 | ||
}} | }} |
Latest revision as of 23:27, 18 September 2015
Short description: | p5@FLJ23867 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FLJ23867_5end |
Coexpression cluster: | NA |
Association with transcript: | -226bp_to_NR_026900, uc001god.3_5end |
EntrezGene: | FLJ23867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.56e-19 | 1 |
seminiferous tubule epithelial cell | 1.56e-19 | 1 |
Sertoli cell | 1.56e-19 | 1 |
smooth muscle cell of the subclavian artery | 2.90e-15 | 5 |
smooth muscle cell of prostate | 1.57e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 3.58e-10 | 2 |
prostate stromal cell | 2.32e-07 | 3 |
light melanocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.56e-19 | 1 |
seminiferous tubule of testis | 1.56e-19 | 1 |
epithelium of male gonad | 1.56e-19 | 1 |
epithelial cord | 1.56e-19 | 1 |
sex cord | 1.56e-19 | 1 |
seminiferous tubule epithelium | 1.56e-19 | 1 |
testis sex cord | 1.56e-19 | 1 |
genital ridge | 1.56e-19 | 1 |
primitive sex cord of indifferent gonad | 1.56e-19 | 1 |
coelomic epithelium | 1.56e-19 | 1 |
stroma of bone marrow | 4.69e-19 | 1 |
thoracic segment blood vessel | 2.90e-15 | 5 |
subclavian artery | 2.90e-15 | 5 |
genitourinary system | 1.37e-11 | 15 |
trunk blood vessel | 3.48e-11 | 7 |
epithelium of gonad | 1.89e-10 | 2 |
internal thoracic artery | 3.58e-10 | 2 |
male organism | 4.34e-08 | 22 |
male reproductive system | 4.34e-08 | 22 |
prostate gland | 1.37e-07 | 11 |
male accessory sex gland | 1.37e-07 | 11 |
embryonic cloacal epithelium | 1.37e-07 | 11 |
epithelium of hindgut | 1.37e-07 | 11 |
urogenital sinus epithelium | 1.37e-07 | 11 |
prostate bud | 1.37e-07 | 11 |
prostate field | 1.37e-07 | 11 |
sex gland | 5.00e-07 | 12 |
male reproductive gland | 5.00e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.05e-07 | 3 |
leiomyoma | 2.05e-07 | 3 |