FFCP PHASE1:Hg19::chr10:70716161..70716187,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:70716161..70716187,+ to FFCP PHASE1:Hg19::chr10:70716161..70716187,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9188 | |EntrezGene=9188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2744 | |HGNC=2744 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR30 | |UniProt=Q9NR30 | ||
|association_with_transcript=-8bp_to_uc001jow.1_5end | |||
|cluster_id=chr10:70716161..70716187,+ | |||
|description=CAGE_peak_4_at_DDX21_5end | |||
|id=chr10:70716161..70716187,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.22e-11!254;CL:0000223!4.34e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.01e-12,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.67e-09;29!UBERON:0001041;9.14e-09;30 | |||
|ontology_enrichment_disease=DOID:14566!1.12e-36!239;DOID:162!2.62e-36!235;DOID:0050687!1.09e-23!143;DOID:305!1.71e-21!106;DOID:0050686!3.20e-15!137;DOID:2531!5.32e-07!51;DOID:0060083!5.32e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.30e-09;14!DOID:305;3.31e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.77e-35,235;DOID:14566,1.13e-33,239;DOID:305,5.55e-25,106;DOID:0050687,3.48e-23,143;DOID:0050686,1.22e-15,137;DOID:1749,2.39e-09,14;DOID:2531,3.57e-08,51;DOID:0060083,3.57e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;5.69e-08;37!UBERON:0001737;3.50e-07;9!UBERON:0001557;3.50e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,7.59e-09,87;UBERON:0008947,2.33e-08,38;UBERON:0003258,2.33e-08,38;UBERON:0000072,1.11e-07,47;UBERON:0000065,1.23e-07,54;UBERON:0001737,2.36e-07,9 | |||
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| ||
|short_description=p4@DDX21 | |||
}} | }} |
Latest revision as of 23:47, 18 September 2015
Short description: | p4@DDX21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DDX21_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_uc001jow.1_5end |
EntrezGene: | DDX21 |
HGNC: | 2744 |
UniProt: | Q9NR30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.01e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
foregut | 7.59e-09 | 87 |
respiratory primordium | 2.33e-08 | 38 |
endoderm of foregut | 2.33e-08 | 38 |
segment of respiratory tract | 1.11e-07 | 47 |
respiratory tract | 1.23e-07 | 54 |
larynx | 2.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.77e-35 | 235 |
disease of cellular proliferation | 1.13e-33 | 239 |
carcinoma | 5.55e-25 | 106 |
cell type cancer | 3.48e-23 | 143 |
organ system cancer | 1.22e-15 | 137 |
squamous cell carcinoma | 2.39e-09 | 14 |
hematologic cancer | 3.57e-08 | 51 |
immune system cancer | 3.57e-08 | 51 |