FFCP PHASE1:Hg19::chr2:9614243..9614279,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285148 | |EntrezGene=285148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27696 | |HGNC=27696 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TAA2 | |UniProt=Q2TAA2 | ||
|association_with_transcript=-379bp_to_ENST00000497473_5end | |association_with_transcript=-379bp_to_ENST00000497473_5end | ||
|cluster_id=chr2:9614243..9614279,+ | |||
|description=CAGE_peak_3_at_IAH1_5end | |description=CAGE_peak_3_at_IAH1_5end | ||
|id=chr2:9614243..9614279,+ | |id=chr2:9614243..9614279,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.41e-12!140;CL:0002087!2.35e-10!119;CL:0000791!2.66e-10!18;CL:0000789!2.66e-10!18;CL:0002420!2.66e-10!18;CL:0002419!2.66e-10!18;CL:0000790!2.66e-10!18;CL:0002031!1.15e-09!124;CL:0000838!4.10e-09!52;CL:0000542!1.11e-08!53;CL:0000051!1.11e-08!53;CL:0000625!7.18e-07!11;CL:0000084!9.91e-07!25;CL:0000827!9.91e-07!25 | |ontology_enrichment_celltype=CL:0000738!4.41e-12!140;CL:0002087!2.35e-10!119;CL:0000791!2.66e-10!18;CL:0000789!2.66e-10!18;CL:0002420!2.66e-10!18;CL:0002419!2.66e-10!18;CL:0000790!2.66e-10!18;CL:0002031!1.15e-09!124;CL:0000838!4.10e-09!52;CL:0000542!1.11e-08!53;CL:0000051!1.11e-08!53;CL:0000625!7.18e-07!11;CL:0000084!9.91e-07!25;CL:0000827!9.91e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.30e-19;18!CL:0000789;1.30e-19;18!CL:0002419;1.30e-19;18!CL:0000084;7.11e-13;25!CL:0000624;8.39e-12;6!CL:0000625;2.32e-11;11!CL:0000542;3.20e-10;53!CL:0000236;1.19e-08;13!CL:0000898;9.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.95e-20,18;CL:0000789,1.95e-20,18;CL:0002420,1.95e-20,18;CL:0002419,1.95e-20,18;CL:0000790,1.95e-20,18;CL:0000738,6.15e-18,136;CL:0000838,7.97e-18,52;CL:0000542,2.49e-17,53;CL:0000051,2.49e-17,53;CL:0002087,2.26e-16,115;CL:0002031,6.29e-14,120;CL:0000084,1.96e-13,25;CL:0000827,1.96e-13,25;CL:0000037,2.78e-13,168;CL:0000988,1.55e-12,177;CL:0000624,5.02e-12,6;CL:0000625,5.59e-12,11;CL:0002032,6.02e-10,161;CL:0000837,6.02e-10,161;CL:0000236,3.74e-08,14;CL:0000898,7.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.30e-19;18!CL:0000051;3.20e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-20!115;UBERON:0001893!1.29e-15!34;UBERON:0002020!3.74e-15!34;UBERON:0003528!3.74e-15!34;UBERON:0001869!5.40e-15!32;UBERON:0002791!5.63e-15!33;UBERON:0001049!1.85e-14!57;UBERON:0005068!1.85e-14!57;UBERON:0006241!1.85e-14!57;UBERON:0007135!1.85e-14!57;UBERON:0002780!2.60e-13!41;UBERON:0001890!2.60e-13!41;UBERON:0006240!2.60e-13!41;UBERON:0003080!1.21e-12!42;UBERON:0002619!6.39e-12!22;UBERON:0002616!9.02e-12!59;UBERON:0000956!3.07e-11!25;UBERON:0000203!3.07e-11!25;UBERON:0001950!6.67e-11!20;UBERON:0000955!7.56e-09!69;UBERON:0006238!7.56e-09!69;UBERON:0001017!5.66e-08!82;UBERON:0003075!5.74e-08!86;UBERON:0007284!5.74e-08!86;UBERON:0005743!2.56e-07!86;UBERON:0002346!7.08e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-20!115;UBERON:0001893!1.29e-15!34;UBERON:0002020!3.74e-15!34;UBERON:0003528!3.74e-15!34;UBERON:0001869!5.40e-15!32;UBERON:0002791!5.63e-15!33;UBERON:0001049!1.85e-14!57;UBERON:0005068!1.85e-14!57;UBERON:0006241!1.85e-14!57;UBERON:0007135!1.85e-14!57;UBERON:0002780!2.60e-13!41;UBERON:0001890!2.60e-13!41;UBERON:0006240!2.60e-13!41;UBERON:0003080!1.21e-12!42;UBERON:0002619!6.39e-12!22;UBERON:0002616!9.02e-12!59;UBERON:0000956!3.07e-11!25;UBERON:0000203!3.07e-11!25;UBERON:0001950!6.67e-11!20;UBERON:0000955!7.56e-09!69;UBERON:0006238!7.56e-09!69;UBERON:0001017!5.66e-08!82;UBERON:0003075!5.74e-08!86;UBERON:0007284!5.74e-08!86;UBERON:0005743!2.56e-07!86;UBERON:0002346!7.08e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.34e-19;22!UBERON:0001869;2.20e-18;32!UBERON:0001950;2.78e-18;20!UBERON:0001893;1.31e-17;34!UBERON:0002791;1.07e-16;32!UBERON:0000956;5.40e-16;25!UBERON:0000203;5.40e-16;25!UBERON:0003528;1.59e-15;34!UBERON:0002020;1.59e-15;34!UBERON:0002780;7.04e-11;41!UBERON:0001890;7.04e-11;41!UBERON:0000200;1.37e-10;6!UBERON:0000073;5.09e-08;53!UBERON:0002616;5.09e-08;53!UBERON:0000369;2.63e-07;4!UBERON:0002435;2.63e-07;4!UBERON:0000204;2.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.77e-21,32;UBERON:0001893,2.28e-19,34;UBERON:0002619,5.04e-19,22;UBERON:0002791,7.05e-19,32;UBERON:0001950,1.37e-18,20;UBERON:0003528,2.00e-17,34;UBERON:0002020,2.00e-17,34;UBERON:0002780,1.98e-16,41;UBERON:0001890,1.98e-16,41;UBERON:0003080,1.98e-16,41;UBERON:0006240,1.98e-16,41;UBERON:0000956,3.16e-16,25;UBERON:0000203,3.16e-16,25;UBERON:0001049,6.64e-15,56;UBERON:0005068,6.64e-15,56;UBERON:0006241,6.64e-15,56;UBERON:0007135,6.64e-15,56;UBERON:0000073,9.41e-15,53;UBERON:0002616,9.41e-15,53;UBERON:0000955,9.74e-11,68;UBERON:0006238,9.74e-11,68;UBERON:0000200,9.76e-11,6;UBERON:0001017,1.60e-10,81;UBERON:0003056,5.34e-09,61;UBERON:0001016,1.03e-08,89;UBERON:0007023,1.04e-08,114;UBERON:0003075,6.51e-08,82;UBERON:0007284,6.51e-08,82;UBERON:0000369,1.67e-07,4;UBERON:0002435,1.67e-07,4;UBERON:0000204,1.67e-07,4;UBERON:0010082,1.67e-07,4;UBERON:0002346,3.07e-07,86 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,0,0,0.872338524100369,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0,0.251085279189606,0.382067028739756,0.492603536699674,0.708397031823113,0.393364276848904,2.30297638858328,1.08371286321253,0,0,0,0,0,1.17440175733939,1.66198622559563,0.601633342410425,1.08505435357926,0,1.29557466407592,0,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0.736555271975129,0,1.26753171787165,1.06302149982522,1.04829322754188,1.46027220490444,0.450530678524519,0.48217676009124,1.99508920618874,0.79566670879636,0.182664153764634,3.51992488922645,1.09227722252426,0.889509253863555,1.28019066769952,0.800791974072025,1.72425731986345,1.32208974556972,1.90810750907073,1.70763890732835,1.76171156811282,4.20500550937752,1.32171328579026,0,1.31692042387539,2.9506465517075,3.53709686474248,4.5232329779892,1.5046784585161,3.58514493296949,3.78758244587787,3.89653456815823,1.78256731016278,2.94605907474837,2.43687284041983,2.43723477388514,0.25618263945135,1.04047478047903,0.986627427622057,1.65810010671509,0.869409257205157,3.85545064221357,0.802622484269139,1.04535523804977,2.03956816855619,5.3650869104269,3.4362744548263,2.78321661221453,2.22995790026868,2.60433381542567,1.90090408889675,2.40920190524436,1.79181255616186,0,0.947109008176067,1.64225599384209,1.81446068902259,3.7441627409691,3.62061009706997,2.43806866313962,0,0,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0.97364218096405,2.26368658489047,2.12732736830184,4.29283123749616,1.14398982156026,1.85728750664782,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0.367663080345869,1.62028389576352,0,0.22452937262617,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,2.1349799145941,0,0,0.134710672069688,0,0,0,0.234321431833797,0,1.1409436430889,0.747243402759005,0,0,0,0,0,0.413303124703062,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0.600952235626387,0.226864366320042,0.179389635688862,0.640672166455702,0.211931901159562,0.600182192168805,0.412210116953756,1.28820270022815,0.37223371266318,0.675105328965065,0.487185025805993,0.252433774244115,0.368199594569197,0,0.355009592516614,0.403008392910561,0.169560592310488,0.966304265816484,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.936017060556951,0.891786973732369,0,0,0.141775097242386,0,0,0,0,1.76096868026452,0.414656231081544,0.720599767084807,0.75745460055828,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,0.571652865261156,0.224262168690721,0,0,0.258543431515556,0,0,0.797814349754612,0,0.257207374262142,0,0.799266537048298,0.142977993658148,0,0,0,0,0.791951872933429,0.602878754119172,0,0.399891964728228,1.2162378064119,1.50677127429638,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.895304816199478,0,2.75843064282698,2.58753089831421,2.18183161675572,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0,0.173767228936166,0,1.02943027143257,2.89475236572042,3.45142721309787,2.13455115606889,0.303127571446259,1.66435439510497,0.30239029332968,0,1.07423381301644,0.561320188866147,0.256278298511402,0,0,0,0.154209693802656,0.355123450626254,0,0,0,0,0.200506470303285,0,0.229628896329213,0,0.655622074797121,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,1.16004861950546,0.154048617114644,0.460511024178389,0,0.107420244868274,0,0.596586391912706,0.623224249527161,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0.471249609382746,0,1.58510321173008,0,0.975267478179181,0.731140468893853,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0.563391205064483,0,0.294747123039363,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0.507447609232169,1.52927441428475,0,1.66762242820452,1.23408681925858,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,4.97073823883149,0.422008249231538,0,0,0,0.398495976502139,0.828851746593443,0.251932747854276,0,0,0,0.359473404589307,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,2.41197055220813,0,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| ||
|short_description=p3@IAH1 | |short_description=p3@IAH1 | ||
}} | }} |
Latest revision as of 23:51, 18 September 2015
Short description: | p3@IAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IAH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -379bp_to_ENST00000497473_5end |
EntrezGene: | IAH1 |
HGNC: | 27696 |
UniProt: | Q2TAA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.95e-20 | 18 |
alpha-beta T cell | 1.95e-20 | 18 |
immature T cell | 1.95e-20 | 18 |
mature T cell | 1.95e-20 | 18 |
immature alpha-beta T cell | 1.95e-20 | 18 |
leukocyte | 6.15e-18 | 136 |
lymphoid lineage restricted progenitor cell | 7.97e-18 | 52 |
lymphocyte | 2.49e-17 | 53 |
common lymphoid progenitor | 2.49e-17 | 53 |
nongranular leukocyte | 2.26e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 6.29e-14 | 120 |
T cell | 1.96e-13 | 25 |
pro-T cell | 1.96e-13 | 25 |
hematopoietic stem cell | 2.78e-13 | 168 |
hematopoietic cell | 1.55e-12 | 177 |
CD4-positive, alpha-beta T cell | 5.02e-12 | 6 |
CD8-positive, alpha-beta T cell | 5.59e-12 | 11 |
hematopoietic oligopotent progenitor cell | 6.02e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.02e-10 | 161 |
B cell | 3.74e-08 | 14 |
naive T cell | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 5.77e-21 | 32 |
telencephalon | 2.28e-19 | 34 |
regional part of cerebral cortex | 5.04e-19 | 22 |
regional part of telencephalon | 7.05e-19 | 32 |
neocortex | 1.37e-18 | 20 |
brain grey matter | 2.00e-17 | 34 |
gray matter | 2.00e-17 | 34 |
regional part of forebrain | 1.98e-16 | 41 |
forebrain | 1.98e-16 | 41 |
anterior neural tube | 1.98e-16 | 41 |
future forebrain | 1.98e-16 | 41 |
cerebral cortex | 3.16e-16 | 25 |
pallium | 3.16e-16 | 25 |
neural tube | 6.64e-15 | 56 |
neural rod | 6.64e-15 | 56 |
future spinal cord | 6.64e-15 | 56 |
neural keel | 6.64e-15 | 56 |
regional part of nervous system | 9.41e-15 | 53 |
regional part of brain | 9.41e-15 | 53 |
brain | 9.74e-11 | 68 |
future brain | 9.74e-11 | 68 |
gyrus | 9.76e-11 | 6 |
central nervous system | 1.60e-10 | 81 |
pre-chordal neural plate | 5.34e-09 | 61 |
nervous system | 1.03e-08 | 89 |
adult organism | 1.04e-08 | 114 |
neural plate | 6.51e-08 | 82 |
presumptive neural plate | 6.51e-08 | 82 |
corpus striatum | 1.67e-07 | 4 |
striatum | 1.67e-07 | 4 |
ventral part of telencephalon | 1.67e-07 | 4 |
future corpus striatum | 1.67e-07 | 4 |
neurectoderm | 3.07e-07 | 86 |