FFCP PHASE1:Hg19::chr3:52488048..52488064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7134 | |EntrezGene=7134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11943 | |HGNC=11943 | ||
|TSSclassifier=strong | |||
|UniProt=P63316,Q6FH91 | |UniProt=P63316,Q6FH91 | ||
|association_with_transcript=0bp_to_NM_003280,uc003deb.2_5end | |association_with_transcript=0bp_to_NM_003280,uc003deb.2_5end | ||
|cluster_id=chr3:52488048..52488064,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_1_at_TNNC1_5end | |description=CAGE_peak_1_at_TNNC1_5end | ||
|id=chr3:52488048..52488064,- | |id=chr3:52488048..52488064,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000188;2.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.81e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.10e-08;31!UBERON:0006603;7.47e-07;65 | |||
|ontology_enrichment_disease=DOID:305!6.11e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.84e-16!347;UBERON:0003104!1.08e-13!238;UBERON:0009142!1.08e-13!238;UBERON:0000468!2.51e-12!659;UBERON:0000062!6.27e-12!511;UBERON:0000922!4.94e-10!612;UBERON:0001007!4.95e-10!155;UBERON:0001555!4.95e-10!155;UBERON:0007026!4.95e-10!155;UBERON:0004119!7.20e-10!169;UBERON:0000925!7.20e-10!169;UBERON:0006595!7.20e-10!169;UBERON:0000467!7.51e-10!625;UBERON:0000480!1.05e-09!626;UBERON:0000077!3.29e-09!130;UBERON:0007023!5.56e-09!115;UBERON:0004921!2.07e-08!129;UBERON:0004185!2.07e-08!129;UBERON:0002050!4.14e-08!605;UBERON:0005423!4.14e-08!605;UBERON:0000923!7.36e-08!604;UBERON:0005291!7.36e-08!604;UBERON:0006598!7.36e-08!604;UBERON:0002532!7.36e-08!604;UBERON:0000064!7.84e-08!219;UBERON:0001737!3.87e-07!9;UBERON:0000475!4.14e-07!365;UBERON:0001557!7.36e-07!19 | |ontology_enrichment_uberon=UBERON:0000481!1.84e-16!347;UBERON:0003104!1.08e-13!238;UBERON:0009142!1.08e-13!238;UBERON:0000468!2.51e-12!659;UBERON:0000062!6.27e-12!511;UBERON:0000922!4.94e-10!612;UBERON:0001007!4.95e-10!155;UBERON:0001555!4.95e-10!155;UBERON:0007026!4.95e-10!155;UBERON:0004119!7.20e-10!169;UBERON:0000925!7.20e-10!169;UBERON:0006595!7.20e-10!169;UBERON:0000467!7.51e-10!625;UBERON:0000480!1.05e-09!626;UBERON:0000077!3.29e-09!130;UBERON:0007023!5.56e-09!115;UBERON:0004921!2.07e-08!129;UBERON:0004185!2.07e-08!129;UBERON:0002050!4.14e-08!605;UBERON:0005423!4.14e-08!605;UBERON:0000923!7.36e-08!604;UBERON:0005291!7.36e-08!604;UBERON:0006598!7.36e-08!604;UBERON:0002532!7.36e-08!604;UBERON:0000064!7.84e-08!219;UBERON:0001737!3.87e-07!9;UBERON:0000475!4.14e-07!365;UBERON:0001557!7.36e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.31e-13;16!UBERON:0002036;1.31e-13;16!UBERON:0001737;7.25e-09;9!UBERON:0001557;7.25e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.39e-09,9;UBERON:0001557,8.22e-08,19;UBERON:0007023,1.82e-07,114;UBERON:0004921,4.94e-07,118 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,4.00293193412522,0,1.74467704820074,0,0,0,25.8020633326584,55.1262922698218,1.52908960491121,2.11013582582763,1.23766352960047,0.994192127183747,0,0,0,0,0.246242116153576,0,0.626909442956176,2.86235987131057,1.09499540058307,1.63205431473244,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.434539556882471,0.795285947051099,0.973269740605272,0.378139268656271,0.665188192387692,1.49319135678314,17.8786438054378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,1.06400514659507,19.0630384048384,0,8.38669664618344,1.55605517699883,0,0.326923806226917,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0.516628905878827,0,0.741800787835671,0,0,0.168336113954066,1.7516592782075,0.831192346452549,2.19488810440419,0.919463387397059,0.901428353439581,1.47461838108027,1.79389635688862,5.76604949810132,1.27159140695737,0,0.309157587715317,2.06112432036503,5.3973888336161,0,0.0974370051611986,1.51460264546469,2.94559675655358,0,0.355009592516614,0.201504196455281,3.39121184620975,0,0,0,1.82960559194393,2.51806559810822,4.53156377191122,3.10983165046111,5.55105871926382,4.37972830890996,1.56449532329816,4.5026865673502,0,0,0,36.5568012123118,27.8164738628868,21.2089706297464,33.5293677106478,29.6316043965672,25.6252268639984,33.9774896563614,37.0858569086904,18.4678635334267,0,0,1.2347220339942,285.196900087951,0,0,0,0,18.6942426585533,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0.771622122786426,1.41849132023278,0.266422179016099,0,2.17048642156577,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,74.996716853806,15.6162005138291,11.4599016473533,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.613457458595699,4.00136416847742,0,0,0.178428988797162,0.315404830067869,0,1.20378439891088,0,0,0,1.29058417979192,0.0868836144680828,1.76221041716467,492.067669744767,0,0,0,2.12189300012382,11.6504807657348,0.907170879989041,0,0.153461973288062,0.280660094433074,0.512556597022804,1.53512174720011,0.804269605718038,8.90508398669946,0,0.177561725313127,0,0,0,10.6356315640628,0,0,0,0.364182336013434,0,1.35359883872224,0.770153371044148,3.13739907670742,0,0.211103257785751,0,0,0,0,1.35473218771926,6.52196706011309,0.764628819135115,4.15538004464362,0.223874754722178,0,0,16.6692581325653,33.1294792156703,24.4033795998227,12.6740444326698,2.1060976908219,1.56768049849117,0,0,0,77.8199282251582,36.9716681075147,98.8563665236274,144.728401108757,3.54486808065303,52.9310932786934,167.385096245222,1366.81981124871,0,0,0,0,1.39453664789186,0,0.6970372701606,0,0,0,0.18532421910392,0,2.232950216158,3.48017367190598,0,0,0,0.318203247925937,0,2.87795932133304,0.274537029736055,0.235624804691373,0,0,0,11.2155759990606,0,0,0.545999645631943,0,0,0,0,1.75380354101505,0.578775534266688,0,0.202910376962704,3.40805847909725,0.281695602532241,0.286822704408103,1.96498082026242,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,14.6864329211775,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,25.1036567149562,103.947824368443,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,1.8714054040822,41.0222901961303,7.03891026147178,0,0,1.19372242368845,2.07875276582847,0.614321404198464,0,0,0,0,1.47787785689595,8.76691148304707,0.828851746593443,0.755798243562828,0,0,0,0.629078458031288,0.716084698702437,0,8.28604607350242,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,10.9329069625889,0,0,0,0,0,0,0,1.76926815889959,2.36438095162838,4.60709334023342,2.50558466093677,0,2.46240827212151,0,10.8365035062388,2.51321404347362,12.7117425148749,1.27600463892768,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0.189753732724185,0,0,52.0712658027681,28.2706142867882,2.380275037163,0,1.14994833854341,2.4441205797345,0,0,0,0.539209063845416,2264.07154302988,0,0,1.56531695145672,0,0.394584402849391,1.20990716048664,0.30607276163049,3.47526187956684,0.300646838828985,0.103688191397247,0,0,0,0,5.40758137456606,3.18951747930219,483.016751786669,1.27390116638691,0,370.420536673104,2.40780445460263,4.25727857671975,4.16609107391258,6.56923656425674,148.199217194305,14.5622609040975,170.163497807741,0,0,0.316553979779393,35.3948002749993,0.160317640503067,0.426905989478705,0.39961921916426,0.432271251462318,57.7264444676215,0.514784993585894,0,0,5.1852687615695,24.5986612993241,28.6611798895793,0.101998217636322,0,0,0.136905378891993,0,0.859530882839914,0.262887354279314,1410.65540882616,4417.0671728252,829.14334338622,2632.1685845777,6777.90852612459,9633.19596047843,3464.5173091955,0.720599767084807,151.44473438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| ||
|short_description=p1@TNNC1 | |short_description=p1@TNNC1 | ||
}} | }} |
Latest revision as of 23:58, 18 September 2015
Short description: | p1@TNNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNNC1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_NM_003280, uc003deb.2_5end |
EntrezGene: | TNNC1 |
HGNC: | 11943 |
UniProt: | P63316Q6FH91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.39e-09 | 9 |
upper respiratory tract | 8.22e-08 | 19 |
adult organism | 1.82e-07 | 114 |
subdivision of digestive tract | 4.94e-07 | 118 |