FFCP PHASE2:Hg19::chr17:1945301..1945344,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:124641 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:24203 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=124641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24203 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8WZ82 | ||
|association_with_transcript=24bp_to_ENST00000263084,NM_080822,uc002ftx.2_5end | |association_with_transcript=24bp_to_ENST00000263084,NM_080822,uc002ftx.2_5end | ||
|cluster_id=chr17:1945301..1945344,+ | |cluster_id=chr17:1945301..1945344,+ |
Latest revision as of 00:22, 19 September 2015
Short description: | p1@OVCA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OVCA2_5end |
Coexpression cluster: | C1636_Mesenchymal_Alveolar_Placental_Smooth_Fibroblast_Bronchial_Hair |
Association with transcript: | 24bp_to_ENST00000263084, NM_080822, uc002ftx.2_5end |
EntrezGene: | OVCA2 |
HGNC: | 24203 |
UniProt: | Q8WZ82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@OVCA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic cell | 6.75e-21 | 250 |
mesodermal cell | 3.06e-20 | 121 |
epithelial cell | 4.54e-13 | 253 |
smooth muscle cell | 8.88e-12 | 43 |
smooth muscle myoblast | 8.88e-12 | 43 |
endothelial cell | 4.87e-11 | 36 |
muscle cell | 1.49e-10 | 55 |
muscle precursor cell | 1.64e-10 | 58 |
myoblast | 1.64e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.64e-10 | 58 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
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vasculature | 1.81e-15 | 78 |
vascular system | 1.81e-15 | 78 |
vessel | 1.45e-14 | 68 |
unilaminar epithelium | 5.09e-14 | 148 |
epithelial tube | 1.79e-13 | 117 |
mesoderm | 2.10e-13 | 315 |
mesoderm-derived structure | 2.10e-13 | 315 |
presumptive mesoderm | 2.10e-13 | 315 |
splanchnic layer of lateral plate mesoderm | 2.41e-13 | 83 |
epithelial tube open at both ends | 5.45e-13 | 59 |
Showing 1 to 10 of 46 entries