FFCP PHASE1:Hg19::chr1:66798006..66798040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=Q07343,Q5TEK5 | |UniProt=Q07343,Q5TEK5 | ||
|association_with_transcript=213bp_to_NM_001037339,uc001dcq.2_5end | |association_with_transcript=213bp_to_NM_001037339,uc001dcq.2_5end | ||
|cluster_id=chr1:66798006..66798040,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_PDE4B_5end | |description=CAGE_peak_1_at_PDE4B_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.38e-23!42;CL:0000738!1.90e-21!140;CL:0000860!1.79e-19!45;CL:0002087!1.19e-16!119;CL:0000766!6.72e-15!76;CL:0002009!4.58e-14!65;CL:0002031!1.34e-13!124;CL:0002194!4.28e-13!63;CL:0000576!4.28e-13!63;CL:0000040!4.28e-13!63;CL:0000559!4.28e-13!63;CL:0000557!4.28e-12!71;CL:0000037!5.22e-11!172;CL:0000566!5.22e-11!172;CL:0002139!5.37e-11!24;CL:0000988!9.86e-10!182;CL:0000839!1.03e-09!70;CL:0002032!1.84e-09!165;CL:0000837!1.84e-09!165;CL:0000071!9.10e-09!18;CL:0002546!9.10e-09!18;CL:0000115!2.75e-08!35;CL:0000094!8.93e-07!8 | |ontology_enrichment_celltype=CL:0002057!2.38e-23!42;CL:0000738!1.90e-21!140;CL:0000860!1.79e-19!45;CL:0002087!1.19e-16!119;CL:0000766!6.72e-15!76;CL:0002009!4.58e-14!65;CL:0002031!1.34e-13!124;CL:0002194!4.28e-13!63;CL:0000576!4.28e-13!63;CL:0000040!4.28e-13!63;CL:0000559!4.28e-13!63;CL:0000557!4.28e-12!71;CL:0000037!5.22e-11!172;CL:0000566!5.22e-11!172;CL:0002139!5.37e-11!24;CL:0000988!9.86e-10!182;CL:0000839!1.03e-09!70;CL:0002032!1.84e-09!165;CL:0000837!1.84e-09!165;CL:0000071!9.10e-09!18;CL:0002546!9.10e-09!18;CL:0000115!2.75e-08!35;CL:0000094!8.93e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-20;33!CL:0002057;2.62e-20;33!CL:0000473;1.80e-14;39!CL:0000234;1.80e-14;39!CL:0000576;1.26e-12;48!CL:0002139;1.44e-11;24!CL:0000071;3.36e-09;18!CL:0000766;6.04e-09;69!CL:0000115;1.54e-07;36!CL:0002087;2.63e-07;104!CL:0000094;4.41e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;2.62e-20;33!CL:0002057;2.62e-20;33!CL:0000473;1.80e-14;39!CL:0000234;1.80e-14;39!CL:0000576;1.26e-12;48!CL:0002139;1.44e-11;24!CL:0000071;3.36e-09;18!CL:0000766;6.04e-09;69!CL:0000115;1.54e-07;36!CL:0002087;2.63e-07;104!CL:0000094;4.41e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-24,42;CL:0002057,1.34e-24,42;CL:0000738,9.42e-24,136;CL:0000473,1.16e-21,48;CL:0000234,1.16e-21,48;CL:0002087,2.74e-18,115;CL:0000766,3.19e-17,72;CL:0002009,3.13e-16,61;CL:0002031,1.67e-15,120;CL:0002194,3.74e-15,59;CL:0000576,3.74e-15,59;CL:0000040,3.74e-15,59;CL:0000559,3.74e-15,59;CL:0000557,4.33e-14,67;CL:0000037,2.27e-13,168;CL:0000988,3.90e-12,177;CL:0000839,1.34e-11,66;CL:0002139,1.55e-11,24;CL:0002032,1.58e-11,161;CL:0000837,1.58e-11,161;CL:0000071,3.52e-09,18;CL:0002546,3.52e-09,18;CL:0000115,1.35e-08,36;CL:0000763,3.73e-08,108;CL:0000049,3.73e-08,108;CL:0000094,4.47e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-18;42!CL:0002546;3.36e-09;18 | |ontology_enrichment_development_v019=CL:0002057;5.05e-18;42!CL:0002546;3.36e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.08e-16!112;UBERON:0002390!1.13e-14!102;UBERON:0003061!1.13e-14!102;UBERON:0007023!1.13e-13!115;UBERON:0003081!1.75e-11!216;UBERON:0002371!6.53e-10!80;UBERON:0001474!1.51e-09!86;UBERON:0004765!5.31e-09!101;UBERON:0001434!5.31e-09!101;UBERON:0001986!9.10e-09!18;UBERON:0004638!9.10e-09!18;UBERON:0004852!9.10e-09!18;UBERON:0002405!1.07e-08!115;UBERON:0001009!1.50e-08!113;UBERON:0004535!2.14e-08!110;UBERON:0000178!6.32e-07!15;UBERON:0000179!6.32e-07!15;UBERON:0000463!6.32e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!4.08e-16!112;UBERON:0002390!1.13e-14!102;UBERON:0003061!1.13e-14!102;UBERON:0007023!1.13e-13!115;UBERON:0003081!1.75e-11!216;UBERON:0002371!6.53e-10!80;UBERON:0001474!1.51e-09!86;UBERON:0004765!5.31e-09!101;UBERON:0001434!5.31e-09!101;UBERON:0001986!9.10e-09!18;UBERON:0004638!9.10e-09!18;UBERON:0004852!9.10e-09!18;UBERON:0002405!1.07e-08!115;UBERON:0001009!1.50e-08!113;UBERON:0004535!2.14e-08!110;UBERON:0000178!6.32e-07!15;UBERON:0000179!6.32e-07!15;UBERON:0000463!6.32e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.36e-09;18!UBERON:0001986;3.36e-09;18!UBERON:0004852;3.36e-09;18!UBERON:0000178;2.88e-07;15!UBERON:0000179;2.88e-07;15!UBERON:0000463;2.88e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.36e-09;18!UBERON:0001986;3.36e-09;18!UBERON:0004852;3.36e-09;18!UBERON:0000178;2.88e-07;15!UBERON:0000179;2.88e-07;15!UBERON:0000463;2.88e-07;15 | ||
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| ||
|short_description=p1@PDE4B | |short_description=p1@PDE4B | ||
}} | }} |
Latest revision as of 00:24, 19 September 2015
Short description: | p1@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE4B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 213bp_to_NM_001037339, uc001dcq.2_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | Q07343Q5TEK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-24 | 42 |
leukocyte | 9.42e-24 | 136 |
defensive cell | 1.16e-21 | 48 |
phagocyte | 1.16e-21 | 48 |
nongranular leukocyte | 2.74e-18 | 115 |
myeloid leukocyte | 3.19e-17 | 72 |
macrophage dendritic cell progenitor | 3.13e-16 | 61 |
hematopoietic lineage restricted progenitor cell | 1.67e-15 | 120 |
monopoietic cell | 3.74e-15 | 59 |
monocyte | 3.74e-15 | 59 |
monoblast | 3.74e-15 | 59 |
promonocyte | 3.74e-15 | 59 |
granulocyte monocyte progenitor cell | 4.33e-14 | 67 |
hematopoietic stem cell | 2.27e-13 | 168 |
hematopoietic cell | 3.90e-12 | 177 |
myeloid lineage restricted progenitor cell | 1.34e-11 | 66 |
endothelial cell of vascular tree | 1.55e-11 | 24 |
hematopoietic oligopotent progenitor cell | 1.58e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-11 | 161 |
blood vessel endothelial cell | 3.52e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.52e-09 | 18 |
endothelial cell | 1.35e-08 | 36 |
myeloid cell | 3.73e-08 | 108 |
common myeloid progenitor | 3.73e-08 | 108 |
granulocyte | 4.47e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.74e-18 | 108 |
hematopoietic system | 1.41e-16 | 98 |
blood island | 1.41e-16 | 98 |
lateral plate mesoderm | 3.60e-15 | 203 |
adult organism | 3.18e-14 | 114 |
immune system | 9.59e-13 | 93 |
bone marrow | 2.04e-11 | 76 |
bone element | 6.75e-11 | 82 |
skeletal element | 7.57e-10 | 90 |
skeletal system | 7.76e-10 | 100 |
blood vessel endothelium | 3.52e-09 | 18 |
endothelium | 3.52e-09 | 18 |
cardiovascular system endothelium | 3.52e-09 | 18 |
circulatory system | 1.59e-08 | 112 |
cardiovascular system | 2.30e-08 | 109 |
blood | 3.11e-07 | 15 |
haemolymphatic fluid | 3.11e-07 | 15 |
organism substance | 3.11e-07 | 15 |