FFCP PHASE2:Hg19::chr10:70992740..70992781,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:80201 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:23302 |TSSclassifier=stron...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
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|EntrezGene= | |EntrezGene=80201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=23302 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 00:53, 19 September 2015
| Short description: | p4@HKDC1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_HKDC1_5end |
| Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
| Association with transcript: | 0bp_to_uc010qje.1_5end |
| EntrezGene: | HKDC1 |
| HGNC: | 23302 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@HKDC1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 2.04e-39 | 18 |
| alpha-beta T cell | 2.04e-39 | 18 |
| immature T cell | 2.04e-39 | 18 |
| mature T cell | 2.04e-39 | 18 |
| immature alpha-beta T cell | 2.04e-39 | 18 |
| T cell | 7.36e-36 | 25 |
| pro-T cell | 7.36e-36 | 25 |
| CD8-positive, alpha-beta T cell | 6.13e-24 | 11 |
| CD4-positive, alpha-beta T cell | 5.20e-20 | 6 |
| lymphoid lineage restricted progenitor cell | 6.85e-17 | 52 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 1.60e-16 | 15 |
| haemolymphatic fluid | 1.60e-16 | 15 |
| organism substance | 1.60e-16 | 15 |
| thymus | 1.40e-08 | 4 |
| hemolymphoid system gland | 1.40e-08 | 4 |
| thymic region | 1.40e-08 | 4 |
| pharyngeal gland | 1.40e-08 | 4 |
| thymus primordium | 1.40e-08 | 4 |
| hemopoietic organ | 5.00e-08 | 7 |
| immune organ | 5.00e-08 | 7 |
Showing 1 to 10 of 10 entries
