FFCP PHASE1:Hg19::chr17:20492136..20492165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=257468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17638 | |HGNC=17638 | ||
|UniProt= | |TSSclassifier=strong | ||
|UniProt=NA | |||
|association_with_transcript=-205bp_to_ENST00000340731_5end | |association_with_transcript=-205bp_to_ENST00000340731_5end | ||
|cluster_id=chr17:20492136..20492165,+ | |||
|description=CAGE_peak_1_at_MEIS3P2_5end | |description=CAGE_peak_1_at_MEIS3P2_5end | ||
|id=chr17:20492136..20492165,+ | |id=chr17:20492136..20492165,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.79e-18!180;CL:0000057!1.41e-12!75 | |ontology_enrichment_celltype=CL:0000055!8.79e-18!180;CL:0000057!1.41e-12!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.06e-11,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.64e-17!365;UBERON:0004121!5.68e-12!169;UBERON:0000468!2.46e-11!659;UBERON:0000924!3.51e-11!173;UBERON:0006601!3.51e-11!173;UBERON:0000033!4.74e-11!123;UBERON:0000481!5.11e-11!347;UBERON:0003075!1.09e-10!86;UBERON:0007284!1.09e-10!86;UBERON:0000153!2.25e-10!129;UBERON:0007811!2.25e-10!129;UBERON:0005743!7.27e-10!86;UBERON:0002346!1.36e-09!90;UBERON:0000073!3.13e-09!94;UBERON:0001016!3.13e-09!94;UBERON:0001017!5.12e-09!82;UBERON:0000467!7.61e-09!625;UBERON:0000480!1.20e-08!626;UBERON:0003056!1.44e-08!61;UBERON:0000956!4.22e-08!25;UBERON:0000203!4.22e-08!25;UBERON:0002619!4.74e-08!22;UBERON:0000062!1.40e-07!511;UBERON:0002616!1.63e-07!59;UBERON:0001950!1.96e-07!20;UBERON:0000955!2.22e-07!69;UBERON:0006238!2.22e-07!69;UBERON:0001049!2.50e-07!57;UBERON:0005068!2.50e-07!57;UBERON:0006241!2.50e-07!57;UBERON:0007135!2.50e-07!57;UBERON:0001869!3.35e-07!32;UBERON:0000922!6.09e-07!612;UBERON:0003080!7.14e-07!42;UBERON:0001893!9.24e-07!34;UBERON:0000483!9.52e-07!309 | |ontology_enrichment_uberon=UBERON:0000475!2.64e-17!365;UBERON:0004121!5.68e-12!169;UBERON:0000468!2.46e-11!659;UBERON:0000924!3.51e-11!173;UBERON:0006601!3.51e-11!173;UBERON:0000033!4.74e-11!123;UBERON:0000481!5.11e-11!347;UBERON:0003075!1.09e-10!86;UBERON:0007284!1.09e-10!86;UBERON:0000153!2.25e-10!129;UBERON:0007811!2.25e-10!129;UBERON:0005743!7.27e-10!86;UBERON:0002346!1.36e-09!90;UBERON:0000073!3.13e-09!94;UBERON:0001016!3.13e-09!94;UBERON:0001017!5.12e-09!82;UBERON:0000467!7.61e-09!625;UBERON:0000480!1.20e-08!626;UBERON:0003056!1.44e-08!61;UBERON:0000956!4.22e-08!25;UBERON:0000203!4.22e-08!25;UBERON:0002619!4.74e-08!22;UBERON:0000062!1.40e-07!511;UBERON:0002616!1.63e-07!59;UBERON:0001950!1.96e-07!20;UBERON:0000955!2.22e-07!69;UBERON:0006238!2.22e-07!69;UBERON:0001049!2.50e-07!57;UBERON:0005068!2.50e-07!57;UBERON:0006241!2.50e-07!57;UBERON:0007135!2.50e-07!57;UBERON:0001869!3.35e-07!32;UBERON:0000922!6.09e-07!612;UBERON:0003080!7.14e-07!42;UBERON:0001893!9.24e-07!34;UBERON:0000483!9.52e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.34e-09;22!UBERON:0000956;2.91e-09;25!UBERON:0000203;2.91e-09;25!UBERON:0001950;6.34e-09;20!UBERON:0001869;7.33e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.72e-12,132;UBERON:0002619,1.57e-10,22;UBERON:0000956,6.26e-10,25;UBERON:0000203,6.26e-10,25;UBERON:0001950,9.66e-10,20;UBERON:0004121,2.89e-09,171;UBERON:0000924,2.89e-09,171;UBERON:0006601,2.89e-09,171;UBERON:0003075,3.40e-09,82;UBERON:0007284,3.40e-09,82;UBERON:0001017,4.01e-08,81;UBERON:0001869,4.24e-08,32;UBERON:0002346,4.55e-08,86;UBERON:0003056,5.20e-08,61;UBERON:0001016,6.91e-08,89;UBERON:0003528,2.27e-07,34;UBERON:0002020,2.27e-07,34;UBERON:0000073,3.42e-07,53;UBERON:0002616,3.42e-07,53;UBERON:0001893,3.63e-07,34;UBERON:0002791,4.06e-07,32;UBERON:0010371,4.08e-07,104;UBERON:0001049,5.22e-07,56;UBERON:0005068,5.22e-07,56;UBERON:0006241,5.22e-07,56;UBERON:0007135,5.22e-07,56 | |||
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|phase1_expression=1.99846217197612,1.71280419112787,0.986680828671798,3.00219895059391,5.36353313312745,0,5.06599756336621,0.631719873426831,1.56711376919903,0.737201809504527,0,0.655324116390517,1.05506791291381,0.123766352960047,1.65698687863958,1.34465029290355,1.80808358407193,1.46062018077475,2.92759679274304,1.47745269692145,0.816002764977012,2.82109249330279,0.85870796139317,1.36874425072884,1.12988375635323,0,0,0,0.393364276848904,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,4.2194645408365,0.722878304769133,2.50668955317945,1.30361867064741,0.795285947051099,0.973269740605272,1.32348744029695,0.665188192387692,1.22968699970376,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,2.48485975847659,1.2663051166458,4.50191214764944,0.860509862246441,1.06400514659507,2.24271040056923,1.06748995729705,2.22000793575444,1.8672662123986,0.67355336034844,0,1.96764655938411,1.15235184896,1.64025002283658,1.24864030732128,0,1.94283284717341,0.939475989150119,0.323745888736263,0.421352420106746,1.63323337003915,0.859840221182376,2.78979609174567,3.56400857184616,3.4617370098998,0.910161361938026,5.74894513452991,1.85169725349473,1.37630371859161,1.6623846929051,2.63386572528503,3.98434134538726,4.35690370829131,1.02088964844019,1.25572744982203,1.70845911054854,1.90738711043606,2.40072876867522,2.26715564324566,2.83404594050192,1.30281799432113,5.06328996723799,2.82567314967476,2.77677151668526,0.920498986422993,5.01102776138317,2.13005755509969,2.31729825923573,1.3564847384839,0.386521706326594,0.818238361772504,0.860413786167011,1.09776335516636,1.19276791489337,2.20768491452085,4.66474747569167,2.01856680700503,0.36497735907583,0,1.28648187638577,0,1.85747171212792,2.88751792667834,0.354920400119532,0.337169380156203,0,0.220587945464788,0.435758888184812,0.71181185733329,0.269662616320329,0.588664395376038,0,0,1.40241773803446,1.6462960453256,2.94017422771084,0,0,0.590789906681404,0,0.368965315629341,2.91665277507493,0.439001141634502,0,0.100528972411631,0.370353780634118,2.6064664424826,5.19967392639789,0,2.78232971940184,2.11335649624479,0,0,0,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,2.35174979478403,0.141775097242386,1.07470227243418,0,0.766765358330422,0,0.088048434013226,0.207328115540772,0,0.25248486685276,5.65131259200304,2.67391897890794,8.20522130470329,0,2.98199728839638,1.20137223137567,7.71731368102561,0,0.87192013766656,0.1466765716419,0.904902010304444,10.7296933755565,3.381211010224,3.19125739901845,1.04007436911366,0,0,0.266422179016099,2.28764789853036,2.17048642156577,1.64648067356154,0.65147236858747,2.13235169245527,0,3.91871190177462,7.84380112740265,4.69873058555668,0,0,0,0.718874566474748,0,0,1.73737568001095,0.821905290201534,0.179060963239896,0,0,0,0,0.508189248444927,0,5.41302168944387,3.18280904135263,1.91381625495949,0,0,0,1.2269149171914,0.500170521059677,0,2.9115920614313,1.60586089917446,2.68094105557689,3.27995961979597,0,0,0,0,0.184369168541703,2.60650843404249,2.74121620447837,3.0882908142977,0.206768026122887,0,0,2.42502057157008,0,4.5358543999452,0.744323423456331,5.21770709179412,3.36792113319688,1.02511319404561,0.511707249066704,2.41280881715411,2.96836132889982,0.771048469013278,1.24293207719189,0.574890092096664,1.55776328755086,0.581051892299796,1.0877350463246,1.40354529212299,0.736647911487171,1.26295892981067,0.910455840033585,3.67148361886388,0.451199612907412,0.770153371044148,0,0,0.73886140225013,1.13733384070897,0.340187410553031,0,0,0,1.50506932156456,0,0,0.447749509444357,0,0,2.05160100093111,0.656029291399411,1.95227036798582,0.515205058238611,0.640986253728404,0.495056999523528,1.72279661398852,0,3.21367859688319,1.06337790121334,0.770243085573222,0.921022048356777,0.964856007391714,2.0409846524972,1.59518363305651,0.426133137080504,0.623224249527161,0.495854746082934,1.34533047155574,1.27612712494584,0.30347334256665,3.71876439437829,2.51849877464512,0.6970372701606,0.308033580176089,0.532306030317022,1.73986598415015,1.66791797193528,0.429374660225974,1.116475108079,0,1.14378116354295,0.511795582622668,0.42793898803392,1.27281299170375,3.13979456079692,0.539617372749944,2.74537029736055,1.17812402345686,1.2130948894399,0,0.842516912477962,2.43816869544795,0.243713489631284,0,1.50149902548784,1.41405431953713,1.13008116620243,2.75682671773062,0,0.876901770507525,0.578775534266688,0.655894752046633,0.405820753925408,0.6196469961995,1.40847801266121,1.29070216983646,3.04572027140676,0,1.41904425628239,2.9555068941673,2.63435914367922,0.379473173765715,3.84928192269481,0.288666338176536,0.670302275535787,1.08890984861323,0.282431402330337,1.2915161180136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| ||
|short_description=p1@MEIS3P2 | |short_description=p1@MEIS3P2 | ||
}} | }} |
Latest revision as of 01:15, 19 September 2015
Short description: | p1@MEIS3P2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEIS3P2_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENST00000340731_5end |
EntrezGene: | MEIS3P2 |
HGNC: | 17638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.06e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.72e-12 | 132 |
regional part of cerebral cortex | 1.57e-10 | 22 |
cerebral cortex | 6.26e-10 | 25 |
pallium | 6.26e-10 | 25 |
neocortex | 9.66e-10 | 20 |
ectoderm-derived structure | 2.89e-09 | 171 |
ectoderm | 2.89e-09 | 171 |
presumptive ectoderm | 2.89e-09 | 171 |
neural plate | 3.40e-09 | 82 |
presumptive neural plate | 3.40e-09 | 82 |
central nervous system | 4.01e-08 | 81 |
cerebral hemisphere | 4.24e-08 | 32 |
neurectoderm | 4.55e-08 | 86 |
pre-chordal neural plate | 5.20e-08 | 61 |
nervous system | 6.91e-08 | 89 |
brain grey matter | 2.27e-07 | 34 |
gray matter | 2.27e-07 | 34 |
regional part of nervous system | 3.42e-07 | 53 |
regional part of brain | 3.42e-07 | 53 |
telencephalon | 3.63e-07 | 34 |
regional part of telencephalon | 4.06e-07 | 32 |
ecto-epithelium | 4.08e-07 | 104 |
neural tube | 5.22e-07 | 56 |
neural rod | 5.22e-07 | 56 |
future spinal cord | 5.22e-07 | 56 |
neural keel | 5.22e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.26e-07 | 14 |