FFCP PHASE1:Hg19::chr19:4867643..4867654,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4867643..4867654,- to FFCP PHASE1:Hg19::chr19:4867643..4867654,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10226 | |EntrezGene=10226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16893 | |HGNC=16893 | ||
|TSSclassifier=strong | |||
|UniProt=O60664 | |UniProt=O60664 | ||
|association_with_transcript=125bp_to_ENST00000221957,NM_001164189,NM_001164194,NM_005817,uc002mbj.2,uc002mbk.2,uc002mbl.3_5end | |||
|cluster_id=chr19:4867643..4867654,- | |||
|description=CAGE_peak_2_at_PLIN3_5end | |||
|id=chr19:4867643..4867654,- | |||
|ontology_enrichment_celltype=CL:0000055!9.12e-39!180;CL:0002371!2.42e-38!591;CL:0000144!4.40e-37!625;CL:0000548!7.69e-33!679;CL:0000004!7.69e-33!679;CL:0000255!7.69e-33!679;CL:0000012!3.84e-32!682;CL:0000222!1.80e-24!119;CL:0000057!6.31e-22!75;CL:0000183!6.59e-22!59;CL:0000680!1.79e-20!57;CL:0000056!1.79e-20!57;CL:0000355!1.79e-20!57;CL:0000187!1.22e-19!54;CL:0000003!5.06e-19!722;CL:0000048!6.11e-19!430;CL:0000723!2.32e-18!436;CL:0000034!3.60e-17!444;CL:0000220!8.00e-17!246;CL:0002321!1.38e-16!248;CL:0000192!1.39e-16!42;CL:0000514!1.39e-16!42;CL:0000393!9.77e-16!60;CL:0000211!9.77e-16!60;CL:0000359!6.81e-14!32;CL:0002620!5.20e-11!23;CL:0000063!1.24e-10!578;CL:0002320!2.12e-08!365;CL:0000134!4.38e-07!358;CL:1000449!8.65e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.07e-13;32!CL:0000192;3.13e-12;43!CL:0000187;2.01e-11;55!CL:0002620;3.80e-11;23!CL:0000057;2.40e-09;73!CL:0000393;1.46e-08;61!CL:0000211;1.46e-08;61!CL:0000134;5.60e-08;55!CL:0002320;1.60e-07;188!CL:0000723;4.32e-07;61!CL:0000048;7.24e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.62e-25,121;CL:0000057,1.23e-22,76;CL:0000680,6.04e-21,58;CL:0000056,6.04e-21,58;CL:0000355,6.04e-21,58;CL:0000187,4.25e-20,55;CL:0000048,4.78e-20,427;CL:0000723,1.34e-19,433;CL:0000034,1.99e-18,441;CL:0002321,4.26e-17,250;CL:0000192,5.62e-17,43;CL:0000514,5.62e-17,43;CL:0000393,3.44e-16,61;CL:0000211,3.44e-16,61;CL:0000359,4.32e-14,32;CL:0002620,3.67e-11,23;CL:0002320,6.34e-09,361;CL:0000134,1.50e-07,354;CL:0000219,5.35e-07,386;CL:1000449,9.98e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;3.13e-12;43!CL:0000355;3.71e-11;58!CL:0000222;5.54e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.05e-24!83;UBERON:0002329!1.05e-24!83;UBERON:0003077!1.05e-24!83;UBERON:0003059!1.05e-24!83;UBERON:0007282!1.05e-24!83;UBERON:0009618!1.05e-24!83;UBERON:0007285!1.05e-24!83;UBERON:0000486!4.82e-23!82;UBERON:0004290!6.05e-23!70;UBERON:0005256!1.35e-20!143;UBERON:0001134!6.72e-19!61;UBERON:0002036!6.72e-19!61;UBERON:0003082!6.72e-19!61;UBERON:0002385!4.40e-18!63;UBERON:0001015!4.40e-18!63;UBERON:0000383!4.40e-18!63;UBERON:0003914!8.20e-16!118;UBERON:0002049!3.06e-15!79;UBERON:0007798!3.06e-15!79;UBERON:0000926!4.66e-15!448;UBERON:0004120!4.66e-15!448;UBERON:0006603!4.66e-15!448;UBERON:0004872!6.26e-15!84;UBERON:0001637!7.64e-15!42;UBERON:0003509!7.64e-15!42;UBERON:0004572!7.64e-15!42;UBERON:0002100!1.29e-13!216;UBERON:0002204!2.54e-13!167;UBERON:0001981!2.72e-13!60;UBERON:0007500!2.72e-13!60;UBERON:0004537!2.72e-13!60;UBERON:0006965!2.72e-13!60;UBERON:0000490!9.04e-13!138;UBERON:0000055!9.54e-13!69;UBERON:0004573!3.65e-12!33;UBERON:0004571!3.65e-12!33;UBERON:0004535!5.40e-11!110;UBERON:0001009!1.97e-10!113;UBERON:0003081!2.62e-10!216;UBERON:0002199!5.35e-10!45;UBERON:0002416!5.35e-10!45;UBERON:0003104!9.94e-10!238;UBERON:0009142!9.94e-10!238;UBERON:0003102!1.32e-09!95;UBERON:0000468!3.09e-09!659;UBERON:0000467!1.72e-08!625;UBERON:0000480!1.81e-08!626;UBERON:0002384!3.02e-08!375;UBERON:0002097!3.16e-08!40;UBERON:0000475!3.27e-08!365;UBERON:0001013!4.54e-07!14;UBERON:0000947!7.25e-07!21;UBERON:0010191!7.25e-07!21;UBERON:0004211!8.65e-07!16;UBERON:0001285!8.65e-07!16;UBERON:0007684!8.65e-07!16;UBERON:0003220!8.65e-07!16;UBERON:0004208!8.65e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.49e-11;33!UBERON:0004571;4.49e-11;33!UBERON:0001637;1.52e-10;42!UBERON:0003509;1.52e-10;42!UBERON:0004572;1.52e-10;42!UBERON:0003914;7.49e-09;74!UBERON:0007500;9.49e-09;56!UBERON:0001981;9.49e-09;56!UBERON:0004537;9.49e-09;56!UBERON:0002097;2.36e-07;41!UBERON:0003102;3.02e-07;50!UBERON:0002199;3.45e-07;46!UBERON:0002416;3.45e-07;46!UBERON:0001013;4.04e-07;14!UBERON:0002385;5.10e-07;31!UBERON:0001015;5.10e-07;31!UBERON:0000383;5.10e-07;31!UBERON:0002049;5.18e-07;75!UBERON:0007798;5.18e-07;75!UBERON:0000947;6.16e-07;21!UBERON:0010191;6.16e-07;21!UBERON:0002384;7.94e-07;198!UBERON:0000055;8.34e-07;65 | |||
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| ||
|short_description=p2@PLIN3 | |||
}} | }} |
Latest revision as of 01:33, 19 September 2015
Short description: | p2@PLIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLIN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_ENST00000221957, NM_001164189, NM_001164194, NM_005817, uc002mbj.2, uc002mbk.2, uc002mbl.3_5end |
EntrezGene: | PLIN3 |
HGNC: | 16893 |
UniProt: | O60664 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.62e-25 | 121 |
fibroblast | 1.23e-22 | 76 |
muscle precursor cell | 6.04e-21 | 58 |
myoblast | 6.04e-21 | 58 |
multi-potent skeletal muscle stem cell | 6.04e-21 | 58 |
muscle cell | 4.25e-20 | 55 |
multi fate stem cell | 4.78e-20 | 427 |
somatic stem cell | 1.34e-19 | 433 |
stem cell | 1.99e-18 | 441 |
embryonic cell | 4.26e-17 | 250 |
smooth muscle cell | 5.62e-17 | 43 |
smooth muscle myoblast | 5.62e-17 | 43 |
electrically responsive cell | 3.44e-16 | 61 |
electrically active cell | 3.44e-16 | 61 |
vascular associated smooth muscle cell | 4.32e-14 | 32 |
skin fibroblast | 3.67e-11 | 23 |
connective tissue cell | 6.34e-09 | 361 |
mesenchymal cell | 1.50e-07 | 354 |
motile cell | 5.35e-07 | 386 |
epithelial cell of nephron | 9.98e-07 | 15 |