FFCP PHASE1:Hg19::chr10:71906491..71906500,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219743 | |EntrezGene=219743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28531 | |HGNC=28531 | ||
|TSSclassifier=strong | |||
|UniProt=Q2T9J0 | |UniProt=Q2T9J0 | ||
|association_with_transcript=0bp_to_NM_001040273,NM_173555,uc001jqr.2,uc001jqs.2,uc001jqt.2_5end | |association_with_transcript=0bp_to_NM_001040273,NM_173555,uc001jqr.2,uc001jqs.2,uc001jqt.2_5end | ||
|cluster_id=chr10:71906491..71906500,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_TYSND1_5end | |description=CAGE_peak_3_at_TYSND1_5end | ||
|id=chr10:71906491..71906500,- | |id=chr10:71906491..71906500,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:5409;1.50e-09;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.50e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.32e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.328402357799783,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.658589785919804,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0.179515288819544,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0.138258436151731,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0,0.169732529954025,0.212574920101683,0.247871528518004,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.159633859057151,0,0,0.207471757392654,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0.158013611732727,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,1.9027214524411,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0.199882311849858,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,6.51696804676859,3.21556956187414,0,0,0,0.23806443146374,0.193766729508018,0.0620747142958579,0.112131862580613,0.190941474834495,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.328402357799783,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.658589785919804,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0.179515288819544,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0.138258436151731,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0,0.169732529954025,0.212574920101683,0.247871528518004,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.159633859057151,0,0,0.207471757392654,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0.158013611732727,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,1.9027214524411,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0.199882311849858,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,6.51696804676859,3.21556956187414,0,0,0,0.23806443146374,0.193766729508018,0.0620747142958579,0.112131862580613,0.190941474834495,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TYSND1 | |short_description=p3@TYSND1 | ||
}} | }} |
Latest revision as of 01:37, 19 September 2015
Short description: | p3@TYSND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TYSND1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_001040273, NM_173555, uc001jqr.2, uc001jqs.2, uc001jqt.2_5end |
EntrezGene: | TYSND1 |
HGNC: | 28531 |
UniProt: | Q2T9J0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.32e-09 | 4 |