FFCP PHASE1:Hg19::chr7:5567148..5567194,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=132 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=128bp_to_BC009636_5end | |||
|cluster_id=chr7:5567148..5567194,- | |||
|description=CAGE_peak_8_at_ACTB_5end | |||
|id=chr7:5567148..5567194,- | |||
|ontology_enrichment_celltype=CL:0000766!3.72e-08!76;CL:0002371!9.28e-08!591;CL:0000144!1.36e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.17e-08,72;CL:0000473,5.13e-08,48;CL:0000234,5.13e-08,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.54e-08!216;UBERON:0002204!1.06e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.55e-10,315;UBERON:0004120,1.55e-10,315;UBERON:0006603,1.55e-10,315;UBERON:0003081,2.97e-08,203;UBERON:0002204,1.72e-07,167 | |||
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| |||
|short_description=p8@ACTB | |||
}} |
Latest revision as of 01:52, 19 September 2015
Short description: | p8@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_BC009636_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.17e-08 | 72 |
defensive cell | 5.13e-08 | 48 |
phagocyte | 5.13e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.55e-10 | 315 |
mesoderm-derived structure | 1.55e-10 | 315 |
presumptive mesoderm | 1.55e-10 | 315 |
lateral plate mesoderm | 2.97e-08 | 203 |
musculoskeletal system | 1.72e-07 | 167 |