FFCP PHASE1:Hg19::chr2:97536830..97536841,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:97536830..97536841,- to FFCP PHASE1:Hg19::chr2:97536830..97536841,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54910 | |EntrezGene=54910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10731 | |HGNC=10731 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4M7 | |UniProt=C9J4M7 | ||
|association_with_transcript=-336bp_to_ENST00000449330_5end | |||
|cluster_id=chr2:97536830..97536841,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_11_at_SEMA4C_5end | |||
|id=chr2:97536830..97536841,- | |||
|ontology_enrichment_celltype=CL:0000148!5.74e-07!10;CL:0000541!5.74e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002567;9.09e-34;3!CL:0000148;6.94e-11;10!CL:0000147;4.82e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,9.10e-34,3;CL:0000148,6.94e-11,10;CL:0000541,6.94e-11,10;CL:0000147,4.82e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.92e-26;1!UBERON:0005425;5.92e-26;1!UBERON:0003056;1.41e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.05e-41!57;UBERON:0005068!4.05e-41!57;UBERON:0006241!4.05e-41!57;UBERON:0007135!4.05e-41!57;UBERON:0007023!9.56e-41!115;UBERON:0002346!6.09e-32!90;UBERON:0003075!6.25e-32!86;UBERON:0007284!6.25e-32!86;UBERON:0002616!1.75e-31!59;UBERON:0000073!1.43e-29!94;UBERON:0001016!1.43e-29!94;UBERON:0005743!9.48e-28!86;UBERON:0001017!1.65e-27!82;UBERON:0000955!1.95e-27!69;UBERON:0006238!1.95e-27!69;UBERON:0002780!6.09e-27!41;UBERON:0001890!6.09e-27!41;UBERON:0006240!6.09e-27!41;UBERON:0003080!3.62e-26!42;UBERON:0001893!3.95e-24!34;UBERON:0002020!8.39e-24!34;UBERON:0003528!8.39e-24!34;UBERON:0002791!2.78e-22!33;UBERON:0001869!4.52e-20!32;UBERON:0002308!3.44e-19!9;UBERON:0000125!3.44e-19!9;UBERON:0003056!5.12e-18!61;UBERON:0003076!2.10e-16!15;UBERON:0003057!2.10e-16!15;UBERON:0002298!2.33e-16!8;UBERON:0000924!1.37e-15!173;UBERON:0006601!1.37e-15!173;UBERON:0004121!3.31e-15!169;UBERON:0009663!1.09e-14!7;UBERON:0000033!2.91e-14!123;UBERON:0000153!3.18e-13!129;UBERON:0007811!3.18e-13!129;UBERON:0004732!2.88e-12!13;UBERON:0002619!4.11e-12!22;UBERON:0000200!2.21e-11!6;UBERON:0002420!3.09e-11!9;UBERON:0007245!3.09e-11!9;UBERON:0010009!3.09e-11!9;UBERON:0010011!3.09e-11!9;UBERON:0000454!3.09e-11!9;UBERON:0001950!4.73e-11!20;UBERON:0000956!1.98e-10!25;UBERON:0000203!1.98e-10!25;UBERON:0004733!4.08e-10!12;UBERON:0002028!4.08e-10!12;UBERON:0007277!4.08e-10!12;UBERON:0002240!2.64e-09!3;UBERON:0001896!3.89e-09!3;UBERON:0005290!3.89e-09!3;UBERON:0010096!3.89e-09!3;UBERON:0006331!5.54e-09!3;UBERON:0002771!9.49e-09!3;UBERON:0000988!1.14e-08!3;UBERON:0000025!2.90e-08!194;UBERON:0005162!2.97e-07!2;UBERON:0000122!2.97e-07!2;UBERON:0001897!4.47e-07!2;UBERON:0001875!4.73e-07!2;UBERON:0006514!4.73e-07!2;UBERON:0000369!6.09e-07!4;UBERON:0002435!6.09e-07!4;UBERON:0000204!6.09e-07!4;UBERON:0010082!6.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.88e-50;2!UBERON:0000122;1.88e-50;2!UBERON:0002336;2.15e-26;1!UBERON:0011215;2.15e-26;1!UBERON:0001018;2.15e-26;1!UBERON:0002473;2.15e-26;1!UBERON:0005340;2.15e-26;1!UBERON:0003544;2.15e-26;1!UBERON:0005970;2.15e-26;1!UBERON:0002316;2.15e-26;1!UBERON:0001020;2.15e-26;1!UBERON:0002437;2.15e-26;1!UBERON:0002038;5.92e-26;1!UBERON:0000941;5.92e-26;1!UBERON:0001785;5.92e-26;1!UBERON:0002464;5.92e-26;1!UBERON:0004904;5.92e-26;1!UBERON:0001021;5.92e-26;1!UBERON:0009661;5.92e-26;1!UBERON:0002950;5.92e-26;1!UBERON:0001891;5.92e-26;1!UBERON:0009663;4.07e-15;7!UBERON:0003714;1.07e-13;2!UBERON:0001875;1.07e-13;2!UBERON:0006514;1.07e-13;2!UBERON:0002420;5.51e-12;9!UBERON:0000125;5.51e-12;9!UBERON:0007245;5.51e-12;9!UBERON:0002308;5.51e-12;9!UBERON:0010009;5.51e-12;9!UBERON:0010011;5.51e-12;9!UBERON:0000454;5.51e-12;9!UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.88e-50,2;UBERON:0000122,1.88e-50,2;UBERON:0002336,2.16e-26,1;UBERON:0011215,2.16e-26,1;UBERON:0001018,2.16e-26,1;UBERON:0002473,2.16e-26,1;UBERON:0005340,2.16e-26,1;UBERON:0003544,2.16e-26,1;UBERON:0005970,2.16e-26,1;UBERON:0002316,2.16e-26,1;UBERON:0001020,2.16e-26,1;UBERON:0002437,2.16e-26,1;UBERON:0002038,4.61e-26,1;UBERON:0009661,4.61e-26,1;UBERON:0002950,4.61e-26,1;UBERON:0001891,4.61e-26,1;UBERON:0009616,4.61e-26,1;UBERON:0010286,4.61e-26,1;UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0009663,3.06e-15,7;UBERON:0001875,7.30e-14,2;UBERON:0006514,7.30e-14,2;UBERON:0003714,1.07e-13,2;UBERON:0002420,4.42e-12,9;UBERON:0000125,4.42e-12,9;UBERON:0007245,4.42e-12,9;UBERON:0002308,4.42e-12,9;UBERON:0010009,4.42e-12,9;UBERON:0010011,4.42e-12,9;UBERON:0000454,4.42e-12,9;UBERON:0003056,2.77e-10,61;UBERON:0002780,6.13e-10,41;UBERON:0001890,6.13e-10,41;UBERON:0003080,6.13e-10,41;UBERON:0006240,6.13e-10,41;UBERON:0000073,8.16e-08,53;UBERON:0002616,8.16e-08,53;UBERON:0003075,9.98e-08,82;UBERON:0007284,9.98e-08,82;UBERON:0001781,1.69e-07,4;UBERON:0001049,2.02e-07,56;UBERON:0005068,2.02e-07,56;UBERON:0006241,2.02e-07,56;UBERON:0007135,2.02e-07,56;UBERON:0002346,2.23e-07,86;UBERON:0001893,4.21e-07,34;UBERON:0001016,5.51e-07,89 | |||
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| ||
|short_description=p11@SEMA4C | |||
}} | }} |
Latest revision as of 02:07, 19 September 2015
Short description: | p11@SEMA4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SEMA4C_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -336bp_to_ENST00000449330_5end |
EntrezGene: | SEMA4C |
HGNC: | 10731 |
UniProt: | C9J4M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 9.10e-34 | 3 |
melanocyte | 6.94e-11 | 10 |
melanoblast | 6.94e-11 | 10 |
pigment cell | 4.82e-08 | 14 |