FFCP PHASE1:Hg19::chr7:5569255..5569346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493945,uc003sos.3_5end | |association_with_transcript=0bp_to_ENST00000493945,uc003sos.3_5end | ||
|cluster_id=chr7:5569255..5569346,- | |||
|description=CAGE_peak_2_at_ACTB_5end | |description=CAGE_peak_2_at_ACTB_5end | ||
|id=chr7:5569255..5569346,- | |id=chr7:5569255..5569346,- | ||
|ontology_enrichment_celltype=CL:0000055!1.41e-24!180;CL:0000222!5.20e-24!119;CL:0002371!5.84e-17!591;CL:0000183!8.50e-17!59;CL:0000144!1.95e-16!625;CL:0000192!7.45e-16!42;CL:0000514!7.45e-16!42;CL:0000680!1.09e-15!57;CL:0000056!1.09e-15!57;CL:0000355!1.09e-15!57;CL:0000393!2.53e-15!60;CL:0000211!2.53e-15!60;CL:0000220!8.05e-15!246;CL:0002321!8.34e-15!248;CL:0000187!1.18e-14!54;CL:0000548!2.34e-14!679;CL:0000004!2.34e-14!679;CL:0000255!2.34e-14!679;CL:0000359!4.27e-14!32;CL:0000012!2.97e-13!682;CL:0000003!7.51e-09!722;CL:0000115!9.97e-09!35;CL:0000213!1.74e-08!57;CL:0000215!1.74e-08!57;CL:0002078!1.86e-08!44;CL:0000071!4.02e-08!18;CL:0002546!4.02e-08!18;CL:0002139!1.18e-07!24;CL:0000057!2.46e-07!75;CL:1000449!3.32e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.41e-24!180;CL:0000222!5.20e-24!119;CL:0002371!5.84e-17!591;CL:0000183!8.50e-17!59;CL:0000144!1.95e-16!625;CL:0000192!7.45e-16!42;CL:0000514!7.45e-16!42;CL:0000680!1.09e-15!57;CL:0000056!1.09e-15!57;CL:0000355!1.09e-15!57;CL:0000393!2.53e-15!60;CL:0000211!2.53e-15!60;CL:0000220!8.05e-15!246;CL:0002321!8.34e-15!248;CL:0000187!1.18e-14!54;CL:0000548!2.34e-14!679;CL:0000004!2.34e-14!679;CL:0000255!2.34e-14!679;CL:0000359!4.27e-14!32;CL:0000012!2.97e-13!682;CL:0000003!7.51e-09!722;CL:0000115!9.97e-09!35;CL:0000213!1.74e-08!57;CL:0000215!1.74e-08!57;CL:0002078!1.86e-08!44;CL:0000071!4.02e-08!18;CL:0002546!4.02e-08!18;CL:0002139!1.18e-07!24;CL:0000057!2.46e-07!75;CL:1000449!3.32e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.87e-13;32!CL:0000192;9.27e-12;43!CL:0000187;2.06e-08;55!CL:0000071;3.80e-08;18!CL:0000115;8.68e-08;36!CL:0002139;1.09e-07;24!CL:0000393;1.32e-07;61!CL:0000211;1.32e-07;61!CL:1000449;3.39e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.56e-24,121;CL:0000192,6.57e-16,43;CL:0000514,6.57e-16,43;CL:0000680,8.84e-16,58;CL:0000056,8.84e-16,58;CL:0000355,8.84e-16,58;CL:0000393,2.01e-15,61;CL:0000211,2.01e-15,61;CL:0002321,3.13e-15,250;CL:0000187,9.54e-15,55;CL:0000359,4.27e-14,32;CL:0000115,4.43e-09,36;CL:0000213,8.42e-09,58;CL:0000215,8.42e-09,58;CL:0002078,8.60e-09,45;CL:0000071,4.02e-08,18;CL:0002546,4.02e-08,18;CL:0002139,1.18e-07,24;CL:0000057,1.30e-07,76;CL:1000449,3.55e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;9.27e-12;43!CL:0000355;1.47e-08;58!CL:0002546;3.80e-08;18!CL:0000222;2.11e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.24e-22!79;UBERON:0007798!1.24e-22!79;UBERON:0000055!3.75e-19!69;UBERON:0001981!7.39e-19!60;UBERON:0007500!7.39e-19!60;UBERON:0004537!7.39e-19!60;UBERON:0006965!7.39e-19!60;UBERON:0001637!4.24e-18!42;UBERON:0003509!4.24e-18!42;UBERON:0004572!4.24e-18!42;UBERON:0004535!3.66e-17!110;UBERON:0001009!2.14e-15!113;UBERON:0000914!6.68e-15!83;UBERON:0002329!6.68e-15!83;UBERON:0003077!6.68e-15!83;UBERON:0003059!6.68e-15!83;UBERON:0007282!6.68e-15!83;UBERON:0009618!6.68e-15!83;UBERON:0007285!6.68e-15!83;UBERON:0004290!8.20e-15!70;UBERON:0005256!1.33e-14!143;UBERON:0000486!1.42e-13!82;UBERON:0004573!1.71e-13!33;UBERON:0004571!1.71e-13!33;UBERON:0004872!1.74e-13!84;UBERON:0001134!6.70e-13!61;UBERON:0002036!6.70e-13!61;UBERON:0003082!6.70e-13!61;UBERON:0003914!7.44e-13!118;UBERON:0002385!1.64e-12!63;UBERON:0001015!1.64e-12!63;UBERON:0000383!1.64e-12!63;UBERON:0002100!2.67e-12!216;UBERON:0000490!1.06e-10!138;UBERON:0000947!1.72e-08!21;UBERON:0010191!1.72e-08!21;UBERON:0001986!4.02e-08!18;UBERON:0004638!4.02e-08!18;UBERON:0004852!4.02e-08!18;UBERON:0000119!1.50e-07!312;UBERON:0000487!1.55e-07!22;UBERON:0000353!2.81e-07!17;UBERON:0004211!3.32e-07!16;UBERON:0001285!3.32e-07!16;UBERON:0007684!3.32e-07!16;UBERON:0003220!3.32e-07!16;UBERON:0004208!3.32e-07!16;UBERON:0000483!6.52e-07!309;UBERON:0001851!6.58e-07!16 | |ontology_enrichment_uberon=UBERON:0002049!1.24e-22!79;UBERON:0007798!1.24e-22!79;UBERON:0000055!3.75e-19!69;UBERON:0001981!7.39e-19!60;UBERON:0007500!7.39e-19!60;UBERON:0004537!7.39e-19!60;UBERON:0006965!7.39e-19!60;UBERON:0001637!4.24e-18!42;UBERON:0003509!4.24e-18!42;UBERON:0004572!4.24e-18!42;UBERON:0004535!3.66e-17!110;UBERON:0001009!2.14e-15!113;UBERON:0000914!6.68e-15!83;UBERON:0002329!6.68e-15!83;UBERON:0003077!6.68e-15!83;UBERON:0003059!6.68e-15!83;UBERON:0007282!6.68e-15!83;UBERON:0009618!6.68e-15!83;UBERON:0007285!6.68e-15!83;UBERON:0004290!8.20e-15!70;UBERON:0005256!1.33e-14!143;UBERON:0000486!1.42e-13!82;UBERON:0004573!1.71e-13!33;UBERON:0004571!1.71e-13!33;UBERON:0004872!1.74e-13!84;UBERON:0001134!6.70e-13!61;UBERON:0002036!6.70e-13!61;UBERON:0003082!6.70e-13!61;UBERON:0003914!7.44e-13!118;UBERON:0002385!1.64e-12!63;UBERON:0001015!1.64e-12!63;UBERON:0000383!1.64e-12!63;UBERON:0002100!2.67e-12!216;UBERON:0000490!1.06e-10!138;UBERON:0000947!1.72e-08!21;UBERON:0010191!1.72e-08!21;UBERON:0001986!4.02e-08!18;UBERON:0004638!4.02e-08!18;UBERON:0004852!4.02e-08!18;UBERON:0000119!1.50e-07!312;UBERON:0000487!1.55e-07!22;UBERON:0000353!2.81e-07!17;UBERON:0004211!3.32e-07!16;UBERON:0001285!3.32e-07!16;UBERON:0007684!3.32e-07!16;UBERON:0003220!3.32e-07!16;UBERON:0004208!3.32e-07!16;UBERON:0000483!6.52e-07!309;UBERON:0001851!6.58e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.13e-13;42!UBERON:0003509;4.13e-13;42!UBERON:0004572;4.13e-13;42!UBERON:0004573;3.54e-12;33!UBERON:0004571;3.54e-12;33!UBERON:0007500;5.06e-12;56!UBERON:0001981;5.06e-12;56!UBERON:0004537;5.06e-12;56!UBERON:0003914;1.75e-11;74!UBERON:0002049;6.50e-10;75!UBERON:0007798;6.50e-10;75!UBERON:0000055;1.29e-09;65!UBERON:0000947;1.71e-08;21!UBERON:0010191;1.71e-08;21!UBERON:0004638;3.80e-08;18!UBERON:0001986;3.80e-08;18!UBERON:0004852;3.80e-08;18!UBERON:0000487;1.62e-07;22!UBERON:0006555;3.39e-07;15!UBERON:0004819;3.39e-07;15!UBERON:0001285;3.39e-07;15!UBERON:0007684;3.39e-07;15!UBERON:0000353;6.48e-07;15!UBERON:0001851;6.62e-07;15!UBERON:0000025;8.29e-07;93 | |||
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| ||
|short_description=p2@ACTB | |short_description=p2@ACTB | ||
}} | }} |
Latest revision as of 02:12, 19 September 2015
Short description: | p2@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000493945, uc003sos.3_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.56e-24 | 121 |
smooth muscle cell | 6.57e-16 | 43 |
smooth muscle myoblast | 6.57e-16 | 43 |
muscle precursor cell | 8.84e-16 | 58 |
myoblast | 8.84e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.84e-16 | 58 |
electrically responsive cell | 2.01e-15 | 61 |
electrically active cell | 2.01e-15 | 61 |
embryonic cell | 3.13e-15 | 250 |
muscle cell | 9.54e-15 | 55 |
vascular associated smooth muscle cell | 4.27e-14 | 32 |
endothelial cell | 4.43e-09 | 36 |
lining cell | 8.42e-09 | 58 |
barrier cell | 8.42e-09 | 58 |
meso-epithelial cell | 8.60e-09 | 45 |
blood vessel endothelial cell | 4.02e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.02e-08 | 18 |
endothelial cell of vascular tree | 1.18e-07 | 24 |
fibroblast | 1.30e-07 | 76 |
epithelial cell of nephron | 3.55e-07 | 15 |