FFCP PHASE1:Hg19::chr15:75311366..75311379,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=192683 | |EntrezGene=192683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30386 | |HGNC=30386 | ||
|TSSclassifier=strong | |||
|UniProt=Q69YJ5 | |UniProt=Q69YJ5 | ||
|association_with_transcript=87bp_to_AL833230_5end | |association_with_transcript=87bp_to_AL833230_5end | ||
|cluster_id=chr15:75311366..75311379,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_6_at_SCAMP5_5end | |description=CAGE_peak_6_at_SCAMP5_5end | ||
|id=chr15:75311366..75311379,+ | |id=chr15:75311366..75311379,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.72e-07;10!UBERON:0006215;2.63e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.21e-27!57;UBERON:0005068!4.21e-27!57;UBERON:0006241!4.21e-27!57;UBERON:0007135!4.21e-27!57;UBERON:0005743!1.23e-25!86;UBERON:0000073!3.49e-25!94;UBERON:0001016!3.49e-25!94;UBERON:0001017!8.66e-25!82;UBERON:0002346!3.97e-23!90;UBERON:0002780!5.16e-23!41;UBERON:0001890!5.16e-23!41;UBERON:0006240!5.16e-23!41;UBERON:0003075!1.42e-22!86;UBERON:0007284!1.42e-22!86;UBERON:0002616!2.59e-22!59;UBERON:0002020!2.69e-22!34;UBERON:0003528!2.69e-22!34;UBERON:0003080!3.03e-22!42;UBERON:0000955!4.45e-21!69;UBERON:0006238!4.45e-21!69;UBERON:0001869!5.95e-21!32;UBERON:0001893!6.67e-21!34;UBERON:0001950!5.59e-20!20;UBERON:0002619!5.82e-20!22;UBERON:0002791!1.17e-19!33;UBERON:0003056!2.68e-18!61;UBERON:0000956!6.36e-17!25;UBERON:0000203!6.36e-17!25;UBERON:0000924!4.94e-13!173;UBERON:0006601!4.94e-13!173;UBERON:0004121!1.85e-12!169;UBERON:0000033!3.36e-12!123;UBERON:0007023!9.55e-12!115;UBERON:0000153!4.81e-11!129;UBERON:0007811!4.81e-11!129;UBERON:0001871!6.22e-09!7;UBERON:0001872!5.92e-08!5;UBERON:0002420!3.84e-07!9;UBERON:0007245!3.84e-07!9;UBERON:0010009!3.84e-07!9;UBERON:0010011!3.84e-07!9;UBERON:0000454!3.84e-07!9;UBERON:0000025!6.54e-07!194;UBERON:0002308!8.05e-07!9;UBERON:0000125!8.05e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!4.21e-27!57;UBERON:0005068!4.21e-27!57;UBERON:0006241!4.21e-27!57;UBERON:0007135!4.21e-27!57;UBERON:0005743!1.23e-25!86;UBERON:0000073!3.49e-25!94;UBERON:0001016!3.49e-25!94;UBERON:0001017!8.66e-25!82;UBERON:0002346!3.97e-23!90;UBERON:0002780!5.16e-23!41;UBERON:0001890!5.16e-23!41;UBERON:0006240!5.16e-23!41;UBERON:0003075!1.42e-22!86;UBERON:0007284!1.42e-22!86;UBERON:0002616!2.59e-22!59;UBERON:0002020!2.69e-22!34;UBERON:0003528!2.69e-22!34;UBERON:0003080!3.03e-22!42;UBERON:0000955!4.45e-21!69;UBERON:0006238!4.45e-21!69;UBERON:0001869!5.95e-21!32;UBERON:0001893!6.67e-21!34;UBERON:0001950!5.59e-20!20;UBERON:0002619!5.82e-20!22;UBERON:0002791!1.17e-19!33;UBERON:0003056!2.68e-18!61;UBERON:0000956!6.36e-17!25;UBERON:0000203!6.36e-17!25;UBERON:0000924!4.94e-13!173;UBERON:0006601!4.94e-13!173;UBERON:0004121!1.85e-12!169;UBERON:0000033!3.36e-12!123;UBERON:0007023!9.55e-12!115;UBERON:0000153!4.81e-11!129;UBERON:0007811!4.81e-11!129;UBERON:0001871!6.22e-09!7;UBERON:0001872!5.92e-08!5;UBERON:0002420!3.84e-07!9;UBERON:0007245!3.84e-07!9;UBERON:0010009!3.84e-07!9;UBERON:0010011!3.84e-07!9;UBERON:0000454!3.84e-07!9;UBERON:0000025!6.54e-07!194;UBERON:0002308!8.05e-07!9;UBERON:0000125!8.05e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.33e-15;5!UBERON:0001950;3.88e-14;20!UBERON:0002619;6.11e-13;22!UBERON:0000956;1.73e-11;25!UBERON:0000203;1.73e-11;25!UBERON:0001871;2.18e-11;6!UBERON:0000955;1.09e-10;68!UBERON:0002771;1.43e-10;2!UBERON:0000007;2.48e-10;2!UBERON:0002791;8.30e-09;32!UBERON:0001869;8.30e-09;32!UBERON:0000073;1.12e-07;53!UBERON:0002616;1.12e-07;53!UBERON:0002780;1.50e-07;41!UBERON:0001890;1.50e-07;41!UBERON:0003528;1.85e-07;34!UBERON:0002020;1.85e-07;34!UBERON:0001893;2.41e-07;34!UBERON:0002114;2.63e-07;2!UBERON:0001017;5.30e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.05e-17,81;UBERON:0000955,5.51e-16,68;UBERON:0006238,5.51e-16,68;UBERON:0001016,2.63e-15,89;UBERON:0002021,2.70e-15,5;UBERON:0001950,4.76e-14,20;UBERON:0002619,7.36e-13,22;UBERON:0000073,7.25e-12,53;UBERON:0002616,7.25e-12,53;UBERON:0000956,2.04e-11,25;UBERON:0000203,2.04e-11,25;UBERON:0001871,2.69e-11,6;UBERON:0001049,3.11e-11,56;UBERON:0005068,3.11e-11,56;UBERON:0006241,3.11e-11,56;UBERON:0007135,3.11e-11,56;UBERON:0002780,8.72e-11,41;UBERON:0001890,8.72e-11,41;UBERON:0003080,8.72e-11,41;UBERON:0006240,8.72e-11,41;UBERON:0002771,1.43e-10,2;UBERON:0000007,2.72e-10,2;UBERON:0002791,4.62e-09,32;UBERON:0001869,4.62e-09,32;UBERON:0003528,1.46e-08,34;UBERON:0002020,1.46e-08,34;UBERON:0001893,1.46e-08,34;UBERON:0004121,8.55e-08,171;UBERON:0000924,8.55e-08,171;UBERON:0006601,8.55e-08,171;UBERON:0003075,1.17e-07,82;UBERON:0007284,1.17e-07,82;UBERON:0007023,2.12e-07,114;UBERON:0002114,2.47e-07,2;UBERON:0003056,2.56e-07,61;UBERON:0002346,2.70e-07,86;UBERON:0011216,2.92e-07,223 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0.364295288292542,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.795178609928912,0.464775771478074,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0.649243880549111,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,1.93866549219044,1.02044907978036,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0.347249989866585,0,0.361789315876224,0,0.552896299656123,1.77328571372128,0.658156191461918,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0.114536596165916,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576911008668165,0.202210631562555,0,0,0,0.408610218334727,0,0.825236619583403,2.9080823662043,0,0,0.789744236554321,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66386480803938,0.625954653532499,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.431299245586727,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,1.02558182120378,1.26035848110859,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.810451015420736,0.781078098613847,0.206686796501184,0.697573912132975,0.546974809018219,0,0,0.175871244359621,0,0,0,1.21393120847326,0.455324382702595,0,0.230467975111559,0,0.40781839786099,0.591954962065642,0.118193840883968,0,0,0.628462359664008,0,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.397901550322736,0.237840181555137,0,0.549702583727146,0.150962843566674,0,0,1.88126918544609,0,0.235676547101626,0.588925401344836,0,0.8453114551668,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,1.01987235286372,1.30905207102113,0,0,0.462175628631418,0,0,0,0,0.203977659483963,0,0.36757959813938,0.50141507858475,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0.364295288292542,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.795178609928912,0.464775771478074,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0.649243880549111,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,1.93866549219044,1.02044907978036,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0.347249989866585,0,0.361789315876224,0,0.552896299656123,1.77328571372128,0.658156191461918,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0.114536596165916,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576911008668165,0.202210631562555,0,0,0,0.408610218334727,0,0.825236619583403,2.9080823662043,0,0,0.789744236554321,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66386480803938,0.625954653532499,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.431299245586727,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,1.02558182120378,1.26035848110859,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.810451015420736,0.781078098613847,0.206686796501184,0.697573912132975,0.546974809018219,0,0,0.175871244359621,0,0,0,1.21393120847326,0.455324382702595,0,0.230467975111559,0,0.40781839786099,0.591954962065642,0.118193840883968,0,0,0.628462359664008,0,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.397901550322736,0.237840181555137,0,0.549702583727146,0.150962843566674,0,0,1.88126918544609,0,0.235676547101626,0.588925401344836,0,0.8453114551668,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,1.01987235286372,1.30905207102113,0,0,0.462175628631418,0,0,0,0,0.203977659483963,0,0.36757959813938,0.50141507858475,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@SCAMP5 | |short_description=p6@SCAMP5 | ||
}} | }} |
Latest revision as of 02:49, 19 September 2015
Short description: | p6@SCAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCAMP5_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 87bp_to_AL833230_5end |
EntrezGene: | SCAMP5 |
HGNC: | 30386 |
UniProt: | Q69YJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data