FFCP PHASE1:Hg19::chr22:19166269..19166306,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:19166269..19166306,- to FFCP PHASE1:Hg19::chr22:19166269..19166306,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6576 | |EntrezGene=6576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10979 | |HGNC=10979 | ||
|TSSclassifier=strong | |||
|UniProt=P53007 | |UniProt=P53007 | ||
|association_with_transcript=0bp_to_NM_005984,uc002zoz.2,uc002zpa.2_5end | |||
|cluster_id=chr22:19166269..19166306,- | |||
|coexpression_cluster_id=C4087 | |||
|description=CAGE_peak_2_at_SLC25A1_5end | |||
|id=chr22:19166269..19166306,- | |||
|ontology_enrichment_celltype=CL:0002321!1.21e-20!248;CL:0000220!2.05e-20!246;CL:0002371!9.35e-18!591;CL:0000183!2.04e-16!59;CL:0000144!2.33e-16!625;CL:0000222!3.26e-16!119;CL:0000548!1.31e-15!679;CL:0000004!1.31e-15!679;CL:0000255!1.31e-15!679;CL:0000055!5.58e-15!180;CL:0000012!1.13e-14!682;CL:0000393!6.41e-14!60;CL:0000211!6.41e-14!60;CL:0000187!6.67e-14!54;CL:0000680!7.20e-14!57;CL:0000056!7.20e-14!57;CL:0000355!7.20e-14!57;CL:0000192!4.97e-13!42;CL:0000514!4.97e-13!42;CL:1000449!3.37e-09!16;CL:0000359!5.05e-09!32;CL:1000497!1.61e-08!18;CL:0002518!1.61e-08!18;CL:0000066!5.53e-08!254;CL:0002681!1.52e-07!13;CL:0002584!1.52e-07!13;CL:1000507!2.05e-07!12;CL:1000494!2.05e-07!12;CL:0000325!2.10e-07!39;CL:0000003!5.23e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.32e-09;43!CL:1000449;6.18e-09;15!CL:0000359;1.25e-08;32!CL:0000187;1.65e-08;55!CL:1000497;3.15e-08;17!CL:0002518;3.15e-08;17!CL:0000393;1.03e-07;61!CL:0000211;1.03e-07;61!CL:0002681;2.79e-07;12!CL:0002584;2.79e-07;12!CL:1000507;6.46e-07;10!CL:1000494;6.46e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.17e-21,250;CL:0000222,8.72e-17,121;CL:0000393,3.11e-14,61;CL:0000211,3.11e-14,61;CL:0000187,3.22e-14,55;CL:0000680,3.48e-14,58;CL:0000056,3.48e-14,58;CL:0000355,3.48e-14,58;CL:0000192,2.40e-13,43;CL:0000514,2.40e-13,43;CL:0000359,5.05e-09,32;CL:1000449,6.51e-09,15;CL:1000497,3.22e-08,17;CL:0002518,3.22e-08,17;CL:0000066,8.51e-08,253;CL:0002681,2.95e-07,12;CL:0002584,2.95e-07,12;CL:1000507,6.51e-07,10;CL:1000494,6.51e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.32e-09;43!CL:0000355;6.89e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.00e-21!143;UBERON:0003914!6.49e-16!118;UBERON:0000914!3.37e-15!83;UBERON:0002329!3.37e-15!83;UBERON:0003077!3.37e-15!83;UBERON:0003059!3.37e-15!83;UBERON:0007282!3.37e-15!83;UBERON:0009618!3.37e-15!83;UBERON:0007285!3.37e-15!83;UBERON:0002100!1.03e-14!216;UBERON:0004290!1.31e-14!70;UBERON:0000486!6.52e-14!82;UBERON:0000490!1.93e-13!138;UBERON:0002049!4.59e-13!79;UBERON:0007798!4.59e-13!79;UBERON:0003104!1.42e-12!238;UBERON:0009142!1.42e-12!238;UBERON:0002385!2.50e-11!63;UBERON:0001015!2.50e-11!63;UBERON:0000383!2.50e-11!63;UBERON:0001134!2.56e-11!61;UBERON:0002036!2.56e-11!61;UBERON:0003082!2.56e-11!61;UBERON:0000481!6.62e-11!347;UBERON:0004872!7.29e-10!84;UBERON:0000119!2.32e-09!312;UBERON:0004211!3.37e-09!16;UBERON:0001285!3.37e-09!16;UBERON:0007684!3.37e-09!16;UBERON:0003220!3.37e-09!16;UBERON:0004208!3.37e-09!16;UBERON:0006555!6.17e-09!17;UBERON:0005103!6.17e-09!17;UBERON:0000083!6.17e-09!17;UBERON:0009201!6.17e-09!17;UBERON:0004819!6.17e-09!17;UBERON:0006553!6.17e-09!17;UBERON:0003074!6.17e-09!17;UBERON:0003060!6.17e-09!17;UBERON:0000483!6.73e-09!309;UBERON:0000055!7.01e-09!69;UBERON:0000080!9.90e-09!18;UBERON:0002120!9.90e-09!18;UBERON:0004875!9.90e-09!18;UBERON:0005721!9.90e-09!18;UBERON:0005754!9.90e-09!18;UBERON:0007297!9.90e-09!18;UBERON:0001981!1.30e-08!60;UBERON:0007500!1.30e-08!60;UBERON:0004537!1.30e-08!60;UBERON:0006965!1.30e-08!60;UBERON:0004876!2.34e-08!20;UBERON:0001225!1.52e-07!13;UBERON:0008987!1.52e-07!13;UBERON:0004535!2.03e-07!110;UBERON:0009773!2.05e-07!12;UBERON:0001231!2.05e-07!12;UBERON:0004810!2.05e-07!12;UBERON:0005172!2.14e-07!55;UBERON:0005173!2.14e-07!55;UBERON:0000353!2.54e-07!17;UBERON:0001637!4.79e-07!42;UBERON:0003509!4.79e-07!42;UBERON:0004572!4.79e-07!42;UBERON:0002417!5.01e-07!61;UBERON:0000916!5.01e-07!61;UBERON:0000475!5.12e-07!365;UBERON:0009569!5.18e-07!113;UBERON:0001009!5.42e-07!113;UBERON:0003887!6.78e-07!21;UBERON:0006554!8.08e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.18e-09;15!UBERON:0004819;6.18e-09;15!UBERON:0001285;6.18e-09;15!UBERON:0007684;6.18e-09;15!UBERON:0006554;1.79e-07;30!UBERON:0001008;1.79e-07;30!UBERON:0001225;2.79e-07;12!UBERON:0008987;2.79e-07;12!UBERON:0000353;3.82e-07;15!UBERON:0003914;4.51e-07;74!UBERON:0004211;6.46e-07;10!UBERON:0009773;6.46e-07;10!UBERON:0001231;6.46e-07;10!UBERON:0004810;6.46e-07;10 | |||
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| ||
|short_description=p2@SLC25A1 | |||
}} | }} |
Latest revision as of 02:50, 19 September 2015
Short description: | p2@SLC25A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC25A1_5end |
Coexpression cluster: | C4087_Mesenchymal_Adipocyte_Alveolar_Hair_Renal_Fibroblast_Pericytes |
Association with transcript: | 0bp_to_NM_005984, uc002zoz.2, uc002zpa.2_5end |
EntrezGene: | SLC25A1 |
HGNC: | 10979 |
UniProt: | P53007 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.17e-21 | 250 |
mesodermal cell | 8.72e-17 | 121 |
electrically responsive cell | 3.11e-14 | 61 |
electrically active cell | 3.11e-14 | 61 |
muscle cell | 3.22e-14 | 55 |
muscle precursor cell | 3.48e-14 | 58 |
myoblast | 3.48e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.48e-14 | 58 |
smooth muscle cell | 2.40e-13 | 43 |
smooth muscle myoblast | 2.40e-13 | 43 |
vascular associated smooth muscle cell | 5.05e-09 | 32 |
epithelial cell of nephron | 6.51e-09 | 15 |
kidney cell | 3.22e-08 | 17 |
kidney epithelial cell | 3.22e-08 | 17 |
epithelial cell | 8.51e-08 | 253 |
kidney cortical cell | 2.95e-07 | 12 |
renal cortical epithelial cell | 2.95e-07 | 12 |
kidney tubule cell | 6.51e-07 | 10 |
nephron tubule epithelial cell | 6.51e-07 | 10 |