FFCP PHASE1:Hg19::chr12:53846612..53846624,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5094 | |EntrezGene=5094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8648 | |HGNC=8648 | ||
|TSSclassifier=strong | |||
|UniProt=F8W0G4 | |UniProt=F8W0G4 | ||
|association_with_transcript=-3bp_to_ENST00000551104_5end | |association_with_transcript=-3bp_to_ENST00000551104_5end | ||
|cluster_id=chr12:53846612..53846624,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_24_at_PCBP2_5end | |description=CAGE_peak_24_at_PCBP2_5end | ||
|id=chr12:53846612..53846624,+ | |id=chr12:53846612..53846624,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.31e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.97e-34;1!UBERON:0001905;9.86e-18;2!UBERON:0002757;9.86e-18;2!UBERON:0010134;9.86e-18;2!UBERON:0005408;9.86e-18;2!UBERON:0001899;9.86e-18;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0002784;1.50e-09;4!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,7.06e-34,1;UBERON:0000473,1.22e-17,8;UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0003135,4.00e-13,11;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0,0,0,0.579606171470105,0,0,0,0,0,0,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.313808538937,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0,0.211200673038813,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0.567515953566836,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0,0,0,0.594600453887843,0.22589216407792,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,4.77405798774908,9.9146728157786,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0,0,0,0.579606171470105,0,0,0,0,0,0,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.313808538937,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0,0.211200673038813,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0.567515953566836,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0,0,0,0.594600453887843,0.22589216407792,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,4.77405798774908,9.9146728157786,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p24@PCBP2 | |short_description=p24@PCBP2 | ||
}} | }} |
Latest revision as of 03:12, 19 September 2015
Short description: | p24@PCBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PCBP2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -3bp_to_ENST00000551104_5end |
EntrezGene: | PCBP2 |
HGNC: | 8648 |
UniProt: | F8W0G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 7.06e-34 | 1 |
testis | 1.22e-17 | 8 |
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
male reproductive organ | 4.00e-13 | 11 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |