FFCP PHASE1:Hg19::chr4:86396284..86396315,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:86396284..86396315,+
|short_description=p1@ARHGAP24
|description=CAGE_peak_1_at_ARHGAP24_5end
|association_with_transcript=0bp_to_NM_001025616,uc003hpi.1,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N264 | |UniProt=Q8N264 | ||
|association_with_transcript=0bp_to_NM_001025616,uc003hpi.1,uc003hpj.2,uc003hpk.2_5end | |||
|cluster_id=chr4:86396284..86396315,+ | |||
|description=CAGE_peak_1_at_ARHGAP24_5end | |||
|id=chr4:86396284..86396315,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.26e-15!180;CL:0000057!1.01e-13!75;CL:0002620!1.17e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.79e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.79e-15,76;CL:0002620,1.27e-10,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.47e-10!365;UBERON:0004290!8.54e-10!70;UBERON:0000914!8.56e-09!83;UBERON:0002329!8.56e-09!83;UBERON:0003077!8.56e-09!83;UBERON:0003059!8.56e-09!83;UBERON:0007282!8.56e-09!83;UBERON:0009618!8.56e-09!83;UBERON:0007285!8.56e-09!83;UBERON:0003102!1.68e-08!95;UBERON:0007100!2.91e-08!27;UBERON:0000486!1.65e-07!82;UBERON:0000948!3.27e-07!24;UBERON:0005498!3.27e-07!24;UBERON:0004140!3.27e-07!24;UBERON:0009881!3.27e-07!24;UBERON:0004141!3.27e-07!24;UBERON:0003084!3.27e-07!24;UBERON:0007005!3.27e-07!24;UBERON:0004139!3.27e-07!24;UBERON:0004291!3.27e-07!24;UBERON:0002385!3.62e-07!63;UBERON:0001015!3.62e-07!63;UBERON:0000383!3.62e-07!63;UBERON:0004923!4.85e-07!57;UBERON:0001134!6.81e-07!61;UBERON:0002036!6.81e-07!61;UBERON:0003082!6.81e-07!61;UBERON:0000481!7.92e-07!347;UBERON:0002199!8.67e-07!45;UBERON:0002416!8.67e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.09e-09;31!UBERON:0001015;1.09e-09;31!UBERON:0000383;1.09e-09;31!UBERON:0007100;4.81e-09;25!UBERON:0001134;6.09e-09;16!UBERON:0002036;6.09e-09;16!UBERON:0000948;6.49e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,7.07e-10,71;UBERON:0003059,7.07e-10,71;UBERON:0007282,7.07e-10,71;UBERON:0004290,7.07e-10,71;UBERON:0009618,7.07e-10,71;UBERON:0003077,1.81e-09,72;UBERON:0007285,1.81e-09,72;UBERON:0007100,3.95e-09,27;UBERON:0007524,4.47e-09,73;UBERON:0002199,2.92e-08,46;UBERON:0002416,2.92e-08,46;UBERON:0007503,4.26e-08,78;UBERON:0000948,5.93e-08,24;UBERON:0005498,5.93e-08,24;UBERON:0004140,5.93e-08,24;UBERON:0009881,5.93e-08,24;UBERON:0004141,5.93e-08,24;UBERON:0003084,5.93e-08,24;UBERON:0007005,5.93e-08,24;UBERON:0004139,5.93e-08,24;UBERON:0004291,5.93e-08,24;UBERON:0002097,8.05e-08,41;UBERON:0000486,1.69e-07,83;UBERON:0005256,3.49e-07,122;UBERON:0002385,4.52e-07,64;UBERON:0001015,4.52e-07,64;UBERON:0000383,4.52e-07,64;UBERON:0003102,5.13e-07,99;UBERON:0001134,8.98e-07,62;UBERON:0002036,8.98e-07,62;UBERON:0003082,8.98e-07,62;UBERON:0002100,9.04e-07,199 | |||
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| ||
|short_description=p1@ARHGAP24 | |||
}} | }} |
Latest revision as of 03:21, 19 September 2015
Short description: | p1@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001025616, uc003hpi.1, uc003hpj.2, uc003hpk.2_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | Q8N264 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.79e-15 | 76 |
skin fibroblast | 1.27e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
somite | 7.07e-10 | 71 |
presomitic mesoderm | 7.07e-10 | 71 |
presumptive segmental plate | 7.07e-10 | 71 |
dermomyotome | 7.07e-10 | 71 |
trunk paraxial mesoderm | 7.07e-10 | 71 |
paraxial mesoderm | 1.81e-09 | 72 |
presumptive paraxial mesoderm | 1.81e-09 | 72 |
primary circulatory organ | 3.95e-09 | 27 |
dense mesenchyme tissue | 4.47e-09 | 73 |
integument | 2.92e-08 | 46 |
integumental system | 2.92e-08 | 46 |
epithelial vesicle | 4.26e-08 | 78 |
heart | 5.93e-08 | 24 |
primitive heart tube | 5.93e-08 | 24 |
primary heart field | 5.93e-08 | 24 |
anterior lateral plate mesoderm | 5.93e-08 | 24 |
heart tube | 5.93e-08 | 24 |
heart primordium | 5.93e-08 | 24 |
cardiac mesoderm | 5.93e-08 | 24 |
cardiogenic plate | 5.93e-08 | 24 |
heart rudiment | 5.93e-08 | 24 |
skin of body | 8.05e-08 | 41 |
multilaminar epithelium | 1.69e-07 | 83 |
trunk mesenchyme | 3.49e-07 | 122 |
muscle tissue | 4.52e-07 | 64 |
musculature | 4.52e-07 | 64 |
musculature of body | 4.52e-07 | 64 |
surface structure | 5.13e-07 | 99 |
skeletal muscle tissue | 8.98e-07 | 62 |
striated muscle tissue | 8.98e-07 | 62 |
myotome | 8.98e-07 | 62 |
trunk | 9.04e-07 | 199 |