FFCP PHASE1:Hg19::chr18:25756974..25757018,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:25756974..25757018,- to FFCP PHASE1:Hg19::chr18:25756974..25757018,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1000 | |EntrezGene=1000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1759 | |HGNC=1759 | ||
|TSSclassifier=strong | |||
|UniProt=P19022 | |UniProt=P19022 | ||
|association_with_transcript=391bp_to_ENST00000269141_5end | |||
|cluster_id=chr18:25756974..25757018,- | |||
|coexpression_cluster_id=C3710 | |||
|description=CAGE_peak_2_at_CDH2_5end | |||
|id=chr18:25756974..25757018,- | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-29!180;CL:0000222!2.19e-16!119;CL:0000680!1.90e-15!57;CL:0000056!1.90e-15!57;CL:0000355!1.90e-15!57;CL:0000393!4.66e-15!60;CL:0000211!4.66e-15!60;CL:0000187!1.51e-14!54;CL:0000359!3.15e-14!32;CL:0000183!1.61e-13!59;CL:0000192!2.08e-12!42;CL:0000514!2.08e-12!42;CL:0000057!3.55e-12!75;CL:0000220!6.66e-12!246;CL:0002321!7.86e-12!248;CL:0000077!2.92e-08!19;CL:0002494!3.32e-08!16;CL:0002319!4.74e-07!25;CL:0002334!5.98e-07!12;CL:0000133!8.62e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.60e-14;32!CL:0000192;2.10e-09;43!CL:0000077;1.57e-08;19!CL:0002494;1.85e-08;16!CL:0000187;3.03e-08;55!CL:0000393;6.17e-08;61!CL:0000211;6.17e-08;61!CL:0002334;3.47e-07;12!CL:0002319;5.34e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.49e-17,121;CL:0000680,1.39e-15,58;CL:0000056,1.39e-15,58;CL:0000355,1.39e-15,58;CL:0000393,3.33e-15,61;CL:0000211,3.33e-15,61;CL:0000359,1.01e-14,32;CL:0000187,1.19e-14,55;CL:0000192,2.09e-12,43;CL:0000514,2.09e-12,43;CL:0000057,2.66e-12,76;CL:0002321,4.36e-12,250;CL:0000077,1.60e-08,19;CL:0002494,1.82e-08,16;CL:0002334,3.67e-07,12;CL:0002319,4.77e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000514;2.10e-09;43!CL:0000355;2.13e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.93e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000025!2.84e-20!194;UBERON:0003914!6.60e-20!118;UBERON:0004872!1.64e-17!84;UBERON:0000119!2.32e-17!312;UBERON:0000483!2.68e-17!309;UBERON:0000475!4.00e-17!365;UBERON:0000477!2.72e-16!286;UBERON:0001637!1.11e-15!42;UBERON:0003509!1.11e-15!42;UBERON:0004572!1.11e-15!42;UBERON:0001009!4.21e-15!113;UBERON:0004535!3.93e-14!110;UBERON:0004111!7.38e-14!241;UBERON:0000481!1.49e-13!347;UBERON:0001134!1.91e-13!61;UBERON:0002036!1.91e-13!61;UBERON:0003082!1.91e-13!61;UBERON:0004573!4.74e-13!33;UBERON:0004571!4.74e-13!33;UBERON:0002049!5.88e-13!79;UBERON:0007798!5.88e-13!79;UBERON:0001981!6.18e-13!60;UBERON:0007500!6.18e-13!60;UBERON:0004537!6.18e-13!60;UBERON:0006965!6.18e-13!60;UBERON:0005256!1.34e-12!143;UBERON:0002385!1.83e-12!63;UBERON:0001015!1.83e-12!63;UBERON:0000383!1.83e-12!63;UBERON:0000468!2.22e-12!659;UBERON:0000914!5.76e-12!83;UBERON:0002329!5.76e-12!83;UBERON:0003077!5.76e-12!83;UBERON:0003059!5.76e-12!83;UBERON:0007282!5.76e-12!83;UBERON:0009618!5.76e-12!83;UBERON:0007285!5.76e-12!83;UBERON:0007100!9.59e-12!27;UBERON:0004290!3.34e-11!70;UBERON:0000055!3.77e-11!69;UBERON:0000948!1.16e-10!24;UBERON:0005498!1.16e-10!24;UBERON:0004140!1.16e-10!24;UBERON:0009881!1.16e-10!24;UBERON:0004141!1.16e-10!24;UBERON:0003084!1.16e-10!24;UBERON:0007005!1.16e-10!24;UBERON:0004139!1.16e-10!24;UBERON:0004291!1.16e-10!24;UBERON:0000490!1.19e-10!138;UBERON:0000467!3.01e-10!625;UBERON:0000480!5.08e-10!626;UBERON:0002100!2.13e-09!216;UBERON:0000486!2.17e-09!82;UBERON:0000073!2.89e-08!94;UBERON:0001016!2.89e-08!94;UBERON:0005743!5.71e-08!86;UBERON:0000947!1.89e-07!21;UBERON:0010191!1.89e-07!21;UBERON:0000922!2.51e-07!612;UBERON:0001017!2.61e-07!82;UBERON:0002050!5.58e-07!605;UBERON:0005423!5.58e-07!605;UBERON:0003075!5.75e-07!86;UBERON:0007284!5.75e-07!86;UBERON:0000923!6.27e-07!604;UBERON:0005291!6.27e-07!604;UBERON:0006598!6.27e-07!604;UBERON:0002532!6.27e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.19e-12;33!UBERON:0004571;3.19e-12;33!UBERON:0001637;1.10e-11;42!UBERON:0003509;1.10e-11;42!UBERON:0004572;1.10e-11;42!UBERON:0007100;2.55e-11;25!UBERON:0000948;3.42e-10;22!UBERON:0000947;1.45e-07;21!UBERON:0010191;1.45e-07;21!UBERON:0007500;8.80e-07;56!UBERON:0001981;8.80e-07;56!UBERON:0004537;8.80e-07;56 | |||
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|phase1_expression=43.0577758871219,13.06013195735,41.0177315919276,38.0278533741896,28.1585489489191,49.723295873721,12.6649939084155,5.68547886084148,0.522371256399677,2.94880723801811,2.09340350391728,0,0.263766978228454,8.16857929536308,7.29074226601415,30.9269567367817,47.6128677138942,37.245814609756,38.0587583056595,7.87974771691443,4.69201589861782,5.95563970808367,43.2216340567896,30.5229967912532,34.6497685281656,0,0,0,0,0,0.464448369948228,0,0,0,0,0,1.46800219667424,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,14.6284119788377,41.5834533016254,23.5267113792096,0,0.50133791063589,0.289693037921647,0,0,30.9128852126502,24.8336925158072,39.701323133293,6.87640146362991,0,0,2.59637914923747,1.56716763569341,0.930705723632056,0.238490624305342,0,0,6.95668425783468,6.02164216574287,3.47140501607594,9.61023501270816,15.5214791397665,4.95212475492121,7.73281376186199,3.87625138753993,9.24992282985447,16.0665894127042,0,0,0.24406205754817,1.83831540172934,11.3419872703446,3.48268940307911,1.79623498100936,3.37834441449967,9.19899824795299,11.3911879148175,5.31285057398181,0,0,0,49.2002232178365,61.2891676456566,47.9321234543852,152.31024561762,22.6987764606949,30.2765904076846,29.8897188043174,28.3667680679734,24.8968828319813,24.9214743328923,24.0288997576784,4.54072282934794,2.30470369792,1.64025002283658,1.87296046098192,0.570471821544449,1.19558944441441,3.40560046066918,1.29498355494505,2.94946694074722,3.67477508258808,5.03620700978249,1.44656093646072,0,1.23633464639278,0.910161361938026,0,3.70339450698946,4.62938523526267,4.98715407871529,7.90159717585508,6.43624371177941,5.55880817954408,33.2356296658862,47.7176430932373,5.97960688691989,6.35795703478686,43.5132089322383,8.55335992679043,52.0433890892171,27.5452947370753,47.0885966953133,31.374715661906,39.1272350078377,9.02089006694534,4.0411514204703,76.6820719835887,24.6842640657719,30.0122248389563,1.54608682530637,3.27295344709002,0.860413786167011,1.34171076742555,3.97589304964456,5.80969714347592,9.84780022646019,5.2987378683882,6.20461510428911,0,3.21620469096443,1.38134921352481,0,0,8.87301000298829,8.59781919398319,9.15841913557232,10.5882213823098,10.2403338723431,11.3889897173326,8.49437241409036,8.24130153526453,2.30848294167834,0,0,5.7620361586396,11.7606969108434,22.8159062679296,6.87979051674338,8.86184860022106,0,0,23.8479256314951,0,0,0,1.01847289674383,0.651616610620649,1.03993478527958,21.649701303791,38.9526160716258,48.0201559424511,1.73239737313289,1.38895653772983,2.66355813128438,0,0,0,0,0,2.81201501960331,24.3574085888346,6.37987937590739,0.0895585227028483,0,0.766765358330422,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0,0.63497894292169,1.52795370223311,1.17217447210047,6.84289784090821,3.18765227380303,0,1.14330573052231,2.5790149399433,4.79556075716608,5.1336800074665,64.8944013104044,0,5.917119267892,27.1256878916568,21.8415617513869,5.65856223376713,14.1849132023278,6.92697665441858,15.7275793023962,1.62786481617433,7.40916303102692,7.81766842304964,13.8602860009593,13.4631818398683,48.833179083653,33.1182714268112,39.3893585257305,0,0,0,17.7322393063771,13.7834323000937,12.8373214536647,24.4680408268209,11.5066740628215,16.2945476548305,0,0.197030760201927,0,0,74.1956302729593,42.9461517730152,14.6924874427762,19.4318867787845,15.9484687913291,0,0,0.414415513436035,10.9195427630035,7.50255781589516,7.05289061619313,15.5978146148105,14.4527480925701,9.93525214713788,12.651272819213,6.3198680942821,4.5481500811197,4.1389228517002,40.5177615106616,22.4930385620878,1.47702144595741,1.37060810223918,0,0,0,0,0.606255142892519,3.32870879020994,1.5119514666484,75.9209891925457,47.5732117192994,35.6438319930003,51.1275205530247,53.7292611520039,47.4519067373642,38.5886972756977,20.9725183571612,13.6722528491108,10.8407845938228,39.9825910471388,8.01851611373719,0,5.01266175758212,0,7.57775357886405,8.74037606432242,4.45823010862042,10.3775910968705,17.4054661855977,5.49044838423799,8.76835347919564,19.3159480873963,1.13733384070897,3.2317804002538,23.7507507712353,3.08454505380579,12.4635361270172,6.02027728625824,3.56826782263054,0,8.95499018888713,0,0,11.0273553800047,18.3688201591835,16.5942981278795,14.6318236539766,1.83138929636687,1.48517099857058,0,0,62.6667326392222,6.57360884386429,12.4779379862862,9.67073150774616,5.51346289938122,10.8494447316956,6.38073453222605,9.6306088980194,9.70449188549437,1.65284915360978,3.0750410778417,1.53135254993501,0.6069466851333,7.90237433805386,131.591560975208,18.8200062943362,31.7274587581371,22.3568532733149,19.1385258256516,47.8136485288114,59.6830777714103,3.34942532423701,12.0224181393116,10.1034002779627,2.04718233049067,3.42351190427136,27.0472760737046,31.3979456079692,9.713112709499,12.0796293083864,10.7209286134575,20.82479560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| ||
|short_description=p2@CDH2 | |||
}} | }} |
Latest revision as of 03:23, 19 September 2015
Short description: | p2@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH2_5end |
Coexpression cluster: | C3710_Smooth_Fibroblast_heart_Neural_Preadipocyte_cholangiocellular_Lens |
Association with transcript: | 391bp_to_ENST00000269141_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | P19022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.49e-17 | 121 |
muscle precursor cell | 1.39e-15 | 58 |
myoblast | 1.39e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-15 | 58 |
electrically responsive cell | 3.33e-15 | 61 |
electrically active cell | 3.33e-15 | 61 |
vascular associated smooth muscle cell | 1.01e-14 | 32 |
muscle cell | 1.19e-14 | 55 |
smooth muscle cell | 2.09e-12 | 43 |
smooth muscle myoblast | 2.09e-12 | 43 |
fibroblast | 2.66e-12 | 76 |
embryonic cell | 4.36e-12 | 250 |
mesothelial cell | 1.60e-08 | 19 |
cardiocyte | 1.82e-08 | 16 |
preadipocyte | 3.67e-07 | 12 |
neural cell | 4.77e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.93e-07 | 14 |