FFCP PHASE1:Hg19::chr18:25757019..25757024,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1000 | |EntrezGene=1000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1759 | |HGNC=1759 | ||
|TSSclassifier=strong | |||
|UniProt=P19022 | |UniProt=P19022 | ||
|association_with_transcript=385bp_to_ENST00000269141_5end | |association_with_transcript=385bp_to_ENST00000269141_5end | ||
|cluster_id=chr18:25757019..25757024,- | |||
|coexpression_cluster_id=C3710 | |coexpression_cluster_id=C3710 | ||
|description=CAGE_peak_6_at_CDH2_5end | |description=CAGE_peak_6_at_CDH2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.44e-19!180;CL:0000359!3.85e-11!32;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0000057!4.12e-10!75;CL:0000187!6.72e-10!54;CL:0000222!1.29e-09!119;CL:0000183!1.37e-09!59;CL:0000192!3.56e-09!42;CL:0000514!3.56e-09!42;CL:0000393!5.58e-08!60;CL:0000211!5.58e-08!60 | |ontology_enrichment_celltype=CL:0000055!1.44e-19!180;CL:0000359!3.85e-11!32;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0000057!4.12e-10!75;CL:0000187!6.72e-10!54;CL:0000222!1.29e-09!119;CL:0000183!1.37e-09!59;CL:0000192!3.56e-09!42;CL:0000514!3.56e-09!42;CL:0000393!5.58e-08!60;CL:0000211!5.58e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.22e-12;32!CL:0002580;5.02e-08;3!CL:0000192;6.60e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;2.22e-12;32!CL:0002580;5.02e-08;3!CL:0000192;6.60e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.22e-13,32;CL:0000192,6.80e-09,43;CL:0000514,6.80e-09,43;CL:0002580,3.82e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000514;6.60e-07;43 | |ontology_enrichment_development_v019=CL:0000514;6.60e-07;43 | ||
|ontology_enrichment_disease=DOID:2394!4.57e-07!14 | |ontology_enrichment_disease=DOID:2394!4.57e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.36e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;7.36e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,9.74e-10,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;2.17e-12;33!UBERON:0004571;2.17e-12;33!UBERON:0001637;1.14e-10;42!UBERON:0003509;1.14e-10;42!UBERON:0004572;1.14e-10;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.17e-12;33!UBERON:0004571;2.17e-12;33!UBERON:0001637;1.14e-10;42!UBERON:0003509;1.14e-10;42!UBERON:0004572;1.14e-10;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.19e-15,33;UBERON:0004571,6.19e-15,33;UBERON:0001637,4.35e-14,42;UBERON:0003509,4.35e-14,42;UBERON:0004572,4.35e-14,42;UBERON:0004872,2.75e-11,83;UBERON:0003914,4.18e-11,117;UBERON:0007500,6.83e-10,59;UBERON:0001981,6.83e-10,59;UBERON:0004537,6.83e-10,59;UBERON:0006965,6.83e-10,59;UBERON:0002049,3.14e-08,78;UBERON:0007798,3.14e-08,78;UBERON:0000055,5.73e-08,68;UBERON:0004535,6.64e-08,109;UBERON:0001009,1.58e-07,112 | |||
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| ||
|short_description=p6@CDH2 | |short_description=p6@CDH2 | ||
}} | }} |
Latest revision as of 03:23, 19 September 2015
Short description: | p6@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDH2_5end |
Coexpression cluster: | C3710_Smooth_Fibroblast_heart_Neural_Preadipocyte_cholangiocellular_Lens |
Association with transcript: | 385bp_to_ENST00000269141_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | P19022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.22e-13 | 32 |
smooth muscle cell | 6.80e-09 | 43 |
smooth muscle myoblast | 6.80e-09 | 43 |
preadipocyte of the breast | 3.82e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 6.19e-15 | 33 |
systemic arterial system | 6.19e-15 | 33 |
artery | 4.35e-14 | 42 |
arterial blood vessel | 4.35e-14 | 42 |
arterial system | 4.35e-14 | 42 |
splanchnic layer of lateral plate mesoderm | 2.75e-11 | 83 |
epithelial tube | 4.18e-11 | 117 |
epithelial tube open at both ends | 6.83e-10 | 59 |
blood vessel | 6.83e-10 | 59 |
blood vasculature | 6.83e-10 | 59 |
vascular cord | 6.83e-10 | 59 |
vasculature | 3.14e-08 | 78 |
vascular system | 3.14e-08 | 78 |
vessel | 5.73e-08 | 68 |
cardiovascular system | 6.64e-08 | 109 |
circulatory system | 1.58e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.74e-10 | 14 |