FFCP PHASE1:Hg19::chr1:70033001..70033027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57554 | |EntrezGene=57554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=18531 | |HGNC=18531 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NW7 | |UniProt=Q96NW7 | ||
|association_with_transcript=133bp_to_uc001deo.1_5end | |association_with_transcript=133bp_to_uc001deo.1_5end | ||
|cluster_id=chr1:70033001..70033027,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_LRRC7_5end | |description=CAGE_peak_3_at_LRRC7_5end | ||
|id=chr1:70033001..70033027,+ | |id=chr1:70033001..70033027,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.32e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.45e-13;82!UBERON:0010122;5.74e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.69e-55!82;UBERON:0005743!2.61e-53!86;UBERON:0001049!4.01e-51!57;UBERON:0005068!4.01e-51!57;UBERON:0006241!4.01e-51!57;UBERON:0007135!4.01e-51!57;UBERON:0000073!3.18e-50!94;UBERON:0001016!3.18e-50!94;UBERON:0000955!6.70e-45!69;UBERON:0006238!6.70e-45!69;UBERON:0002780!8.71e-44!41;UBERON:0001890!8.71e-44!41;UBERON:0006240!8.71e-44!41;UBERON:0007023!1.33e-42!115;UBERON:0003080!1.82e-42!42;UBERON:0001893!1.97e-42!34;UBERON:0002616!2.91e-42!59;UBERON:0002020!3.63e-42!34;UBERON:0003528!3.63e-42!34;UBERON:0002791!6.29e-41!33;UBERON:0001869!7.22e-40!32;UBERON:0003075!5.55e-38!86;UBERON:0007284!5.55e-38!86;UBERON:0002346!1.54e-35!90;UBERON:0002619!1.03e-33!22;UBERON:0001950!1.56e-30!20;UBERON:0003056!1.59e-30!61;UBERON:0000956!6.78e-29!25;UBERON:0000203!6.78e-29!25;UBERON:0000153!2.94e-27!129;UBERON:0007811!2.94e-27!129;UBERON:0000033!7.97e-26!123;UBERON:0004121!3.75e-25!169;UBERON:0000924!4.13e-24!173;UBERON:0006601!4.13e-24!173;UBERON:0002420!1.96e-15!9;UBERON:0007245!1.96e-15!9;UBERON:0010009!1.96e-15!9;UBERON:0010011!1.96e-15!9;UBERON:0000454!1.96e-15!9;UBERON:0002308!9.06e-15!9;UBERON:0000125!9.06e-15!9;UBERON:0009663!2.77e-12!7;UBERON:0000025!4.28e-11!194;UBERON:0001871!7.32e-11!7;UBERON:0000200!8.77e-11!6;UBERON:0003076!5.90e-10!15;UBERON:0003057!5.90e-10!15;UBERON:0000349!1.43e-09!5;UBERON:0001872!3.13e-09!5;UBERON:0002021!3.76e-09!5;UBERON:0002298!8.78e-09!8;UBERON:0004111!2.63e-08!241;UBERON:0000369!3.30e-08!4;UBERON:0002435!3.30e-08!4;UBERON:0000204!3.30e-08!4;UBERON:0010082!3.30e-08!4;UBERON:0000477!4.06e-07!286;UBERON:0004733!6.81e-07!12;UBERON:0002028!6.81e-07!12;UBERON:0007277!6.81e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.65e-78;32!UBERON:0001893;5.58e-76;34!UBERON:0002791;1.38e-73;32!UBERON:0002619;8.34e-73;22!UBERON:0003528;4.44e-67;34!UBERON:0002020;4.44e-67;34!UBERON:0001950;9.28e-66;20!UBERON:0000956;1.01e-63;25!UBERON:0000203;1.01e-63;25!UBERON:0002780;5.28e-63;41!UBERON:0001890;5.28e-63;41!UBERON:0000073;1.32e-42;53!UBERON:0002616;1.32e-42;53!UBERON:0000955;1.90e-30;68!UBERON:0001017;1.02e-29;75!UBERON:0002420;4.67e-26;9!UBERON:0007245;4.67e-26;9!UBERON:0010009;4.67e-26;9!UBERON:0010011;4.67e-26;9!UBERON:0000454;4.67e-26;9!UBERON:0001016;4.77e-22;83!UBERON:0000200;1.28e-21;6!UBERON:0009663;2.85e-19;7!UBERON:0001871;4.41e-19;6!UBERON:0000349;4.70e-19;5!UBERON:0001872;2.65e-18;5!UBERON:0002021;3.54e-18;5!UBERON:0000369;4.36e-16;4!UBERON:0002435;4.36e-16;4!UBERON:0000204;4.36e-16;4!UBERON:0000125;7.90e-15;9!UBERON:0002308;7.90e-15;9!UBERON:0005383;1.47e-12;3!UBERON:0005382;1.47e-12;3!UBERON:0001870;9.54e-12;3!UBERON:0007023;8.71e-10;114!UBERON:0011216;3.26e-09;132!UBERON:0001873;5.74e-09;2!UBERON:0001876;1.29e-08;2!UBERON:0001954;1.29e-08;2!UBERON:0003022;1.29e-08;2!UBERON:0002421;1.29e-08;2!UBERON:0002600;1.29e-08;2!UBERON:0002771;1.39e-08;2!UBERON:0002702;2.20e-08;2!UBERON:0001875;3.01e-08;2!UBERON:0006514;3.01e-08;2!UBERON:0001897;5.07e-08;2!UBERON:0010225;5.07e-08;2!UBERON:0010314;1.77e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,2.74e-88,34;UBERON:0002780,3.38e-88,41;UBERON:0001890,3.38e-88,41;UBERON:0003080,3.38e-88,41;UBERON:0006240,3.38e-88,41;UBERON:0001869,4.36e-88,32;UBERON:0002791,5.67e-82,32;UBERON:0003528,7.34e-77,34;UBERON:0002020,7.34e-77,34;UBERON:0000073,3.21e-75,53;UBERON:0002616,3.21e-75,53;UBERON:0002619,7.94e-73,22;UBERON:0001017,4.10e-72,81;UBERON:0001049,8.60e-71,56;UBERON:0005068,8.60e-71,56;UBERON:0006241,8.60e-71,56;UBERON:0007135,8.60e-71,56;UBERON:0000955,4.63e-67,68;UBERON:0006238,4.63e-67,68;UBERON:0001950,8.53e-66,20;UBERON:0001016,4.58e-64,89;UBERON:0000956,9.68e-64,25;UBERON:0000203,9.68e-64,25;UBERON:0003056,1.50e-60,61;UBERON:0003075,1.31e-48,82;UBERON:0007284,1.31e-48,82;UBERON:0002346,5.85e-46,86;UBERON:0010371,8.70e-39,104;UBERON:0004121,2.35e-32,171;UBERON:0000924,2.35e-32,171;UBERON:0006601,2.35e-32,171;UBERON:0010314,1.39e-30,132;UBERON:0007023,1.74e-30,114;UBERON:0002420,4.90e-26,9;UBERON:0007245,4.90e-26,9;UBERON:0010009,4.90e-26,9;UBERON:0010011,4.90e-26,9;UBERON:0000454,4.90e-26,9;UBERON:0011216,6.75e-24,223;UBERON:0000200,1.05e-21,6;UBERON:0009663,3.08e-19,7;UBERON:0001871,4.34e-19,6;UBERON:0000349,4.70e-19,5;UBERON:0001872,2.61e-18,5;UBERON:0002021,3.87e-18,5;UBERON:0000025,6.13e-17,192;UBERON:0000369,4.44e-16,4;UBERON:0002435,4.44e-16,4;UBERON:0000204,4.44e-16,4;UBERON:0010082,4.44e-16,4;UBERON:0000125,8.39e-15,9;UBERON:0002308,8.39e-15,9;UBERON:0005383,1.50e-12,3;UBERON:0005382,1.50e-12,3;UBERON:0001870,7.96e-12,3;UBERON:0004111,8.30e-12,240;UBERON:0001873,5.85e-09,2;UBERON:0010122,5.85e-09,2;UBERON:0000483,9.34e-09,306;UBERON:0001876,1.24e-08,2;UBERON:0001954,1.34e-08,2;UBERON:0003022,1.34e-08,2;UBERON:0002421,1.34e-08,2;UBERON:0002600,1.34e-08,2;UBERON:0000119,1.38e-08,309;UBERON:0002771,1.39e-08,2;UBERON:0002702,1.94e-08,2;UBERON:0001875,3.23e-08,2;UBERON:0006514,3.23e-08,2;UBERON:0001897,4.80e-08,2;UBERON:0010225,4.80e-08,2 | |||
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|short_description=p3@LRRC7 | |short_description=p3@LRRC7 | ||
}} | }} |
Latest revision as of 03:26, 19 September 2015
Short description: | p3@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 133bp_to_uc001deo.1_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | Q96NW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.32e-07 | 8 |