FFCP PHASE1:Hg19::chr2:98962946..98962963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1261 | |EntrezGene=1261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2150 | |HGNC=2150 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VAP7 | |UniProt=Q4VAP7 | ||
|association_with_transcript=295bp_to_ENST00000436404_5end | |association_with_transcript=295bp_to_ENST00000436404_5end | ||
|cluster_id=chr2:98962946..98962963,+ | |||
|coexpression_cluster_id=C2709 | |coexpression_cluster_id=C2709 | ||
|description=CAGE_peak_1_at_CNGA3_5end | |description=CAGE_peak_1_at_CNGA3_5end | ||
|id=chr2:98962946..98962963,+ | |id=chr2:98962946..98962963,+ | ||
|ontology_enrichment_celltype=CL:0000047;2.42e-22;2!CL:0002319;1.01e-09;25!CL:0000540;6.72e-08;6!CL:0000404;6.72e-08;6 | |ontology_enrichment_celltype=CL:0000047!2.70e-10!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000047;2.42e-22;2!CL:0002319;1.01e-09;25!CL:0000540;6.72e-08;6!CL:0000404;6.72e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.99e-21,8;CL:0002319,9.55e-10,25;CL:0000540,6.16e-08,6;CL:0000031,6.16e-08,6;CL:0000404,6.16e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.07e-14;3!UBERON:0003057;1.07e-14;3!UBERON:0006601;2.60e-09;82!CL:0000031;6.72e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
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|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@CNGA3 | |short_description=p1@CNGA3 | ||
}} | }} |
Latest revision as of 03:38, 19 September 2015
Short description: | p1@CNGA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNGA3_5end |
Coexpression cluster: | C2709_pituitary_pineal_retinoblastoma_argyrophil_carcinoid_cerebellum_iPS |
Association with transcript: | 295bp_to_ENST00000436404_5end |
EntrezGene: | CNGA3 |
HGNC: | 2150 |
UniProt: | Q4VAP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.99e-21 | 8 |
neural cell | 9.55e-10 | 25 |
neuron | 6.16e-08 | 6 |
neuroblast | 6.16e-08 | 6 |
electrically signaling cell | 6.16e-08 | 6 |