FFCP PHASE1:Hg19::chr11:6440671..6440692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=322 | |EntrezGene=322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=581 | |HGNC=581 | ||
|TSSclassifier=strong | |||
|UniProt=O00213 | |UniProt=O00213 | ||
|association_with_transcript=-27bp_to_ENST00000311051,NM_145689,uc001mdc.1_5end | |association_with_transcript=-27bp_to_ENST00000311051,NM_145689,uc001mdc.1_5end | ||
|cluster_id=chr11:6440671..6440692,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_APBB1_5end | |description=CAGE_peak_2_at_APBB1_5end | ||
|id=chr11:6440671..6440692,- | |id=chr11:6440671..6440692,- | ||
|ontology_enrichment_celltype=CL:0000055!5.26e-10!180;CL:0000183!2.66e-09!59;CL:0000222!6.79e-09!119;CL:0000680!7.10e-09!57;CL:0000056!7.10e-09!57;CL:0000355!7.10e-09!57;CL:0000187!2.28e-08!54;CL:0000192!2.51e-08!42;CL:0000514!2.51e-08!42;CL:0000393!3.48e-08!60;CL:0000211!3.48e-08!60;CL:0000359!6.03e-08!32 | |ontology_enrichment_celltype=CL:0000055!5.26e-10!180;CL:0000183!2.66e-09!59;CL:0000222!6.79e-09!119;CL:0000680!7.10e-09!57;CL:0000056!7.10e-09!57;CL:0000355!7.10e-09!57;CL:0000187!2.28e-08!54;CL:0000192!2.51e-08!42;CL:0000514!2.51e-08!42;CL:0000393!3.48e-08!60;CL:0000211!3.48e-08!60;CL:0000359!6.03e-08!32 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.84e-08,32;CL:0000192,2.45e-07,43;CL:0000514,2.45e-07,43;CL:0000680,6.47e-07,58;CL:0000056,6.47e-07,58;CL:0000355,6.47e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.34e-26!94;UBERON:0001016!5.34e-26!94;UBERON:0001049!6.29e-26!57;UBERON:0005068!6.29e-26!57;UBERON:0006241!6.29e-26!57;UBERON:0007135!6.29e-26!57;UBERON:0000119!2.72e-25!312;UBERON:0000483!2.81e-25!309;UBERON:0005743!4.40e-25!86;UBERON:0007023!6.07e-25!115;UBERON:0000025!1.28e-24!194;UBERON:0001017!1.95e-24!82;UBERON:0002346!2.46e-24!90;UBERON:0002616!4.35e-24!59;UBERON:0000477!9.74e-24!286;UBERON:0003075!1.84e-23!86;UBERON:0007284!1.84e-23!86;UBERON:0004111!5.64e-23!241;UBERON:0000955!2.34e-22!69;UBERON:0006238!2.34e-22!69;UBERON:0000475!9.38e-21!365;UBERON:0003080!2.48e-20!42;UBERON:0002780!1.03e-19!41;UBERON:0001890!1.03e-19!41;UBERON:0006240!1.03e-19!41;UBERON:0000481!5.59e-19!347;UBERON:0000924!6.24e-19!173;UBERON:0006601!6.24e-19!173;UBERON:0004121!4.58e-18!169;UBERON:0003056!2.06e-17!61;UBERON:0001893!2.42e-17!34;UBERON:0002020!2.59e-17!34;UBERON:0003528!2.59e-17!34;UBERON:0002791!1.02e-16!33;UBERON:0000468!1.32e-16!659;UBERON:0001869!4.85e-16!32;UBERON:0004872!9.04e-15!84;UBERON:0000467!5.75e-14!625;UBERON:0000480!7.33e-14!626;UBERON:0000033!8.44e-14!123;UBERON:0000153!2.07e-13!129;UBERON:0007811!2.07e-13!129;UBERON:0002050!3.52e-13!605;UBERON:0005423!3.52e-13!605;UBERON:0000922!3.78e-13!612;UBERON:0000956!5.18e-13!25;UBERON:0000203!5.18e-13!25;UBERON:0002049!5.30e-13!79;UBERON:0007798!5.30e-13!79;UBERON:0002619!5.53e-13!22;UBERON:0000923!8.02e-13!604;UBERON:0005291!8.02e-13!604;UBERON:0006598!8.02e-13!604;UBERON:0002532!8.02e-13!604;UBERON:0000064!1.78e-12!219;UBERON:0001981!3.89e-12!60;UBERON:0007500!3.89e-12!60;UBERON:0004537!3.89e-12!60;UBERON:0006965!3.89e-12!60;UBERON:0001950!4.66e-12!20;UBERON:0000055!7.03e-12!69;UBERON:0004290!1.01e-11!70;UBERON:0000914!4.77e-11!83;UBERON:0002329!4.77e-11!83;UBERON:0003077!4.77e-11!83;UBERON:0003059!4.77e-11!83;UBERON:0007282!4.77e-11!83;UBERON:0009618!4.77e-11!83;UBERON:0007285!4.77e-11!83;UBERON:0002385!9.00e-11!63;UBERON:0001015!9.00e-11!63;UBERON:0000383!9.00e-11!63;UBERON:0001009!9.49e-11!113;UBERON:0001134!1.26e-10!61;UBERON:0002036!1.26e-10!61;UBERON:0003082!1.26e-10!61;UBERON:0001637!8.06e-10!42;UBERON:0003509!8.06e-10!42;UBERON:0004572!8.06e-10!42;UBERON:0004535!1.47e-09!110;UBERON:0003103!4.09e-09!69;UBERON:0003914!2.84e-08!118;UBERON:0000486!7.73e-08!82;UBERON:0005256!1.52e-07!143;UBERON:0002100!1.63e-07!216;UBERON:0004573!1.72e-07!33;UBERON:0004571!1.72e-07!33;UBERON:0007100!1.91e-07!27;UBERON:0000490!5.85e-07!138;UBERON:0003076!8.05e-07!15;UBERON:0003057!8.05e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.09e-16;34!UBERON:0002780;1.98e-16;41!UBERON:0001890;1.98e-16;41!UBERON:0003528;2.28e-16;34!UBERON:0002020;2.28e-16;34!UBERON:0001869;3.22e-16;32!UBERON:0002791;3.27e-16;32!UBERON:0000073;2.15e-15;53!UBERON:0002616;2.15e-15;53!UBERON:0002619;9.74e-15;22!UBERON:0000956;1.03e-14;25!UBERON:0000203;1.03e-14;25!UBERON:0001950;1.42e-13;20!UBERON:0001017;6.99e-11;75!UBERON:0000955;1.62e-10;68!UBERON:0001016;6.72e-10;83!UBERON:0007023;2.16e-08;114!UBERON:0007100;2.38e-07;25!UBERON:0001637;4.95e-07;42!UBERON:0003509;4.95e-07;42!UBERON:0004572;4.95e-07;42!UBERON:0004573;5.87e-07;33!UBERON:0004571;5.87e-07;33 | |||
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|phase1_expression=2.72517568905835,2.35510576280081,1.69145284915165,0,2.68176656656373,1.74467704820074,2.53299878168311,0.631719873426831,1.30592814099919,0.491467873003018,0.697801167972428,0.655324116390517,2.11013582582763,2.84662611808107,2.31978163009541,2.6893005858071,1.20538905604795,1.46062018077475,2.92759679274304,0.369363174230364,1.83600622119828,3.13454721478088,1.43117993565528,1.36874425072884,1.75759695432724,0,0,0,0,0,0,0,1.50602959389125,0,0,0,0,0,0.401088894940283,0.434021741431704,0.447830948479849,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.564727018627814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0,0.444859689486181,0.535081656179426,0,0.339928028092699,0.766440987203842,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,4.87613732627923,2.01210257911091,0.895037932904712,0,2.50668955317945,2.462390822334,0,1.45990461090791,0.661743720148475,1.10864698731282,1.14185221401064,3.40545596294053,0,0.741568885568859,0.324547393654683,0,0,0.238490624305342,0,0,1.19257444420023,3.4409383804245,2.08284300964557,5.6530794192401,2.09749718104953,2.75118041940067,2.71693456497854,3.6178346283706,2.49036383880697,2.34304428935269,1.20848795132744,0.760272105718513,3.1728067481262,1.47065232138347,0.81014194788176,2.23249320710199,0.898117490504679,0.788280363383256,1.53316637465883,0.949265659568129,3.11442964681692,0,0,0.436094052142534,1.98788780678127,1.2663051166458,1.32409180813219,0.286836620748814,1.41867352879343,2.24271040056923,0,4.68668341992604,0.933633106199299,1.0776853765575,1.30769522490767,0.454072282934794,1.15235184896,2.34321431833797,1.24864030732128,2.2818872861778,1.94283284717341,0.822041490506354,0.323745888736263,0.561803226808994,1.42907919878425,1.10550885580591,1.44656093646072,0,1.23633464639278,1.82032272387605,0,1.0100166837244,0.625592599359821,0,0.438977620880838,1.22595118319608,1.65261864797256,0.907457465280168,0.538168907066586,2.56268866582281,1.27159140695737,0.900273288253207,0.92747276314595,0.515281080091258,1.8611685633159,0.337552664482532,0.68205903612839,0,2.39329736469978,0.484938170456436,0.710019185033229,0.806016785821122,0.847802961552438,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.621966330092223,0,0,1.56449532329816,5.78916844373597,4.14404764057442,2.78620756819187,3.60939740834793,0.354920400119532,0.505754070234305,0.482022059766964,0.441175890929576,0.435758888184812,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,2.95262181849859,1.40241773803446,2.057870056657,0,0,0,0,0.882926198829301,0.368965315629341,1.3725424823882,0.439001141634502,0,0.100528972411631,0,0.325808305310325,2.07986957055916,1.44331342025273,0.579652024875384,0.939269553886573,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0.234004265139238,0,0,0.335964256397719,0.708875486211932,0.268675568108545,0,1.15014803749563,0,0.176096868026452,0.207328115540772,0.288239906833923,0.6312121671319,0.888970520090367,3.81988425558278,5.86087236050235,0,1.23392991243988,1.20137223137567,1.14330573052231,0.336393253036082,1.74384027533312,0.51336800074665,2.71470603091333,14.3062578340753,0.845302752556,1.86156681609409,2.08014873822732,0.771622122786426,4.25547396069835,0.266422179016099,1.14382394926518,1.08524321078289,0,0.977208552881205,0.710783897485092,0,2.1100756394171,1.74306691720059,1.59956785891291,0,0,0,1.4377491329495,3.44585807502342,1.42636905040718,1.44781306667579,2.05476322550383,1.61154866915906,0,0.197030760201927,0.431255149719035,0,1.52456774533478,2.60279707715243,3.86644406388848,2.68026024534958,1.91381625495949,0,0,0,0.858840442033979,3.50119364741774,0.542530047399471,2.07970861530807,1.24900292158013,2.52323864054295,1.99140405487612,3.00946099727719,2.27407504055985,1.03473071292505,0.664225598535437,1.65932251687533,1.12948698808508,1.95801157462741,2.74514739048685,0.206768026122887,0,0.320182673410333,1.81876542867756,3.32870879020994,2.41912234663744,2.48107807818777,1.99500565274481,1.96462066103151,2.56278298511402,3.07024349440022,2.2519548960105,2.96836132889982,0.308419387605311,1.24293207719189,0.9033987161519,1.03850885836724,0.929683027679674,0.725156697549733,0.601519410909855,0.0920809889358963,0.803701137152247,1.27463817604702,2.22911505431021,1.35359883872224,0.308061348417659,1.56869953835371,4.38417673959782,0.633309773357254,0,1.02056223165909,0.431831832204279,4.62681758070868,1.62567862526312,2.00675909541941,0.509752546090077,0,1.79099803777743,0,0,1.02580050046556,1.64007322849853,1.62689197332152,1.23649213977267,1.09883357782012,1.23764249880882,0,0.650060246036521,1.6068392984416,1.54673149267395,0.308097234229289,0.307007349452259,0.413509717453592,0.644521469209642,1.30515024522806,0.93749290157711,1.24644849905432,0.165284915360978,0.384380134730212,0,0.20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| ||
|short_description=p2@APBB1 | |short_description=p2@APBB1 | ||
}} | }} |
Latest revision as of 03:47, 19 September 2015
Short description: | p2@APBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APBB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -27bp_to_ENST00000311051, NM_145689, uc001mdc.1_5end |
EntrezGene: | APBB1 |
HGNC: | 581 |
UniProt: | O00213 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.84e-08 | 32 |
smooth muscle cell | 2.45e-07 | 43 |
smooth muscle myoblast | 2.45e-07 | 43 |
muscle precursor cell | 6.47e-07 | 58 |
myoblast | 6.47e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.47e-07 | 58 |