FFCP PHASE1:Hg19::chr22:19929386..19929400,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:19929386..19929400,+
|short_description=p2@COMT
|description=CAGE_peak_2_at_COMT_5end
|association_with_transcript=70bp_to_ENST00000467943_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_ENST00000467943_5end | |||
|cluster_id=chr22:19929386..19929400,+ | |||
|coexpression_cluster_id=C4089 | |||
|description=CAGE_peak_2_at_COMT_5end | |||
|id=chr22:19929386..19929400,+ | |||
|ontology_enrichment_celltype=CL:0002371!2.02e-30!591;CL:0000144!6.32e-27!625;CL:0000548!1.46e-20!679;CL:0000004!1.46e-20!679;CL:0000255!1.46e-20!679;CL:0000055!2.14e-20!180;CL:0000012!3.09e-20!682;CL:0000222!1.50e-16!119;CL:0000048!5.04e-13!430;CL:0000723!6.55e-13!436;CL:0000057!9.57e-13!75;CL:0000183!1.52e-12!59;CL:0000192!2.28e-12!42;CL:0000514!2.28e-12!42;CL:0000220!7.06e-12!246;CL:0000680!1.13e-11!57;CL:0000056!1.13e-11!57;CL:0000355!1.13e-11!57;CL:0002321!4.38e-11!248;CL:0000034!7.01e-11!444;CL:0000187!1.38e-10!54;CL:0000359!1.42e-10!32;CL:0000003!7.87e-10!722;CL:0000063!2.17e-09!578;CL:0002320!2.51e-07!365;CL:0000393!3.49e-07!60;CL:0000211!3.49e-07!60;CL:0000115!5.01e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.44e-10;32!CL:0000134;2.84e-09;55!CL:0000192;7.61e-09;43!CL:0000048;1.66e-07;58!CL:0000723;3.24e-07;61!CL:0000349;5.96e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.74e-17,121;CL:0000048,1.91e-13,427;CL:0000723,2.50e-13,433;CL:0000057,4.97e-13,76;CL:0000192,2.72e-12,43;CL:0000514,2.72e-12,43;CL:0000680,1.21e-11,58;CL:0000056,1.21e-11,58;CL:0000355,1.21e-11,58;CL:0002321,2.28e-11,250;CL:0000034,2.76e-11,441;CL:0000359,1.42e-10,32;CL:0000187,1.46e-10,55;CL:0002320,1.30e-07,361;CL:0000115,2.75e-07,36;CL:0000393,3.59e-07,61;CL:0000211,3.59e-07,61;CL:0000349,5.75e-07,19;CL:0002078,9.05e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;7.61e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.46e-14!84;UBERON:0002049!2.89e-14!79;UBERON:0007798!2.89e-14!79;UBERON:0000055!9.38e-13!69;UBERON:0000914!1.47e-12!83;UBERON:0002329!1.47e-12!83;UBERON:0003077!1.47e-12!83;UBERON:0003059!1.47e-12!83;UBERON:0007282!1.47e-12!83;UBERON:0009618!1.47e-12!83;UBERON:0007285!1.47e-12!83;UBERON:0000486!1.73e-12!82;UBERON:0000926!8.19e-12!448;UBERON:0004120!8.19e-12!448;UBERON:0006603!8.19e-12!448;UBERON:0003081!1.08e-11!216;UBERON:0001981!1.09e-11!60;UBERON:0007500!1.09e-11!60;UBERON:0004537!1.09e-11!60;UBERON:0006965!1.09e-11!60;UBERON:0004290!1.88e-11!70;UBERON:0001637!2.82e-11!42;UBERON:0003509!2.82e-11!42;UBERON:0004572!2.82e-11!42;UBERON:0002204!8.19e-11!167;UBERON:0000467!1.55e-10!625;UBERON:0000480!1.74e-10!626;UBERON:0000468!1.91e-10!659;UBERON:0003914!4.71e-10!118;UBERON:0004535!6.27e-10!110;UBERON:0001134!6.41e-10!61;UBERON:0002036!6.41e-10!61;UBERON:0003082!6.41e-10!61;UBERON:0001009!1.49e-09!113;UBERON:0005256!1.53e-09!143;UBERON:0002385!4.82e-09!63;UBERON:0001015!4.82e-09!63;UBERON:0000383!4.82e-09!63;UBERON:0004573!9.78e-09!33;UBERON:0004571!9.78e-09!33;UBERON:0003102!9.91e-08!95;UBERON:0002100!1.05e-07!216;UBERON:0000490!1.82e-07!138;UBERON:0002384!4.56e-07!375;UBERON:0002199!5.25e-07!45;UBERON:0002416!5.25e-07!45;UBERON:0004923!5.90e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.28e-08;42!UBERON:0003509;1.28e-08;42!UBERON:0004572;1.28e-08;42!UBERON:0004573;4.48e-08;33!UBERON:0004571;4.48e-08;33!UBERON:0007500;2.80e-07;56!UBERON:0001981;2.80e-07;56!UBERON:0004537;2.80e-07;56!UBERON:0000055;5.04e-07;65 | |||
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| ||
|short_description=p2@COMT | |||
}} | }} |
Latest revision as of 03:59, 19 September 2015
Short description: | p2@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COMT_5end |
Coexpression cluster: | C4089_Renal_Mesenchymal_Fibroblast_Pericytes_acute_Preadipocyte_Urothelial |
Association with transcript: | 70bp_to_ENST00000467943_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.74e-17 | 121 |
multi fate stem cell | 1.91e-13 | 427 |
somatic stem cell | 2.50e-13 | 433 |
fibroblast | 4.97e-13 | 76 |
smooth muscle cell | 2.72e-12 | 43 |
smooth muscle myoblast | 2.72e-12 | 43 |
muscle precursor cell | 1.21e-11 | 58 |
myoblast | 1.21e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-11 | 58 |
embryonic cell | 2.28e-11 | 250 |
stem cell | 2.76e-11 | 441 |
vascular associated smooth muscle cell | 1.42e-10 | 32 |
muscle cell | 1.46e-10 | 55 |
connective tissue cell | 1.30e-07 | 361 |
endothelial cell | 2.75e-07 | 36 |
electrically responsive cell | 3.59e-07 | 61 |
electrically active cell | 3.59e-07 | 61 |
extraembryonic cell | 5.75e-07 | 19 |
meso-epithelial cell | 9.05e-07 | 45 |