FFCP PHASE1:Hg19::chrX:11778155..11778177,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:11778155..11778177,+ to FFCP PHASE1:Hg19::chrX:11778155..11778177,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10943 | |EntrezGene=10943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7370 | |HGNC=7370 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482871_5end | |||
|cluster_id=chrX:11778155..11778177,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_7_at_MSL3_5end | |||
|id=chrX:11778155..11778177,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.20e-64!140;CL:0002087!9.33e-63!119;CL:0002031!9.18e-53!124;CL:0000037!4.41e-50!172;CL:0000566!4.41e-50!172;CL:0000988!3.22e-49!182;CL:0002032!1.54e-46!165;CL:0000837!1.54e-46!165;CL:0000542!9.32e-41!53;CL:0000051!9.32e-41!53;CL:0000838!8.42e-40!52;CL:0002057!5.71e-30!42;CL:0000860!1.35e-28!45;CL:0000945!2.60e-26!24;CL:0000826!2.60e-26!24;CL:0000766!6.21e-22!76;CL:0002194!3.27e-20!63;CL:0000576!3.27e-20!63;CL:0000040!3.27e-20!63;CL:0000559!3.27e-20!63;CL:0002009!3.33e-19!65;CL:0000236!2.02e-17!14;CL:0000839!5.99e-17!70;CL:0000557!1.54e-16!71;CL:0000791!1.83e-14!18;CL:0000789!1.83e-14!18;CL:0002420!1.83e-14!18;CL:0002419!1.83e-14!18;CL:0000790!1.83e-14!18;CL:0000763!2.31e-13!112;CL:0000049!2.31e-13!112;CL:0000084!2.92e-13!25;CL:0000827!2.92e-13!25;CL:0000625!7.18e-10!11;CL:0000134!2.27e-09!358;CL:0002320!1.01e-08!365;CL:0000624!2.13e-07!6;CL:0000219!7.51e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.34e-32;24!CL:0000236;1.06e-16;13!CL:0000542;4.12e-16;53!CL:0000784;2.50e-12;3!CL:0002087;9.16e-12;104!CL:0000860;1.83e-10;33!CL:0002057;1.83e-10;33!CL:0000738;1.87e-08;136!CL:0000473;1.85e-07;39!CL:0000234;1.85e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.12e-34,136;CL:0000945,5.36e-33,24;CL:0000826,5.36e-33,24;CL:0002087,8.95e-31,115;CL:0002031,3.78e-29,120;CL:0000037,1.13e-27,168;CL:0000838,6.08e-27,52;CL:0000542,2.48e-26,53;CL:0000051,2.48e-26,53;CL:0002032,7.41e-26,161;CL:0000837,7.41e-26,161;CL:0000988,8.68e-26,177;CL:0000236,3.33e-20,14;CL:0000784,3.48e-12,3;CL:0000860,1.93e-11,42;CL:0002057,1.93e-11,42;CL:0000766,2.91e-10,72;CL:0000473,1.14e-09,48;CL:0000234,1.14e-09,48;CL:0002194,1.44e-08,59;CL:0000576,1.44e-08,59;CL:0000040,1.44e-08,59;CL:0000559,1.44e-08,59;CL:0000134,3.04e-08,354;CL:0002009,3.39e-08,61;CL:0002320,6.57e-08,361;CL:0000839,2.28e-07,66;CL:0000557,3.22e-07,67;CL:0000219,9.79e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;4.12e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.91e-28!102;UBERON:0003061!3.91e-28!102;UBERON:0002193!4.09e-27!112;UBERON:0002371!2.44e-14!80;UBERON:0000178!8.52e-14!15;UBERON:0000179!8.52e-14!15;UBERON:0000463!8.52e-14!15;UBERON:0001474!1.65e-12!86;UBERON:0002405!2.60e-12!115;UBERON:0004765!5.48e-09!101;UBERON:0001434!5.48e-09!101;UBERON:0002384!3.31e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.28e-10,98;UBERON:0003061,9.28e-10,98;UBERON:0002193,1.88e-08,108;UBERON:0002384,1.88e-07,371 | |||
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| ||
|short_description=p7@MSL3 | |||
}} | }} |
Latest revision as of 04:09, 19 September 2015
Short description: | p7@MSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MSL3_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_ENST00000482871_5end |
EntrezGene: | MSL3 |
HGNC: | 7370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.12e-34 | 136 |
lymphocyte of B lineage | 5.36e-33 | 24 |
pro-B cell | 5.36e-33 | 24 |
nongranular leukocyte | 8.95e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 3.78e-29 | 120 |
hematopoietic stem cell | 1.13e-27 | 168 |
lymphoid lineage restricted progenitor cell | 6.08e-27 | 52 |
lymphocyte | 2.48e-26 | 53 |
common lymphoid progenitor | 2.48e-26 | 53 |
hematopoietic oligopotent progenitor cell | 7.41e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-26 | 161 |
hematopoietic cell | 8.68e-26 | 177 |
B cell | 3.33e-20 | 14 |
plasmacytoid dendritic cell | 3.48e-12 | 3 |
classical monocyte | 1.93e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-11 | 42 |
myeloid leukocyte | 2.91e-10 | 72 |
defensive cell | 1.14e-09 | 48 |
phagocyte | 1.14e-09 | 48 |
monopoietic cell | 1.44e-08 | 59 |
monocyte | 1.44e-08 | 59 |
monoblast | 1.44e-08 | 59 |
promonocyte | 1.44e-08 | 59 |
mesenchymal cell | 3.04e-08 | 354 |
macrophage dendritic cell progenitor | 3.39e-08 | 61 |
connective tissue cell | 6.57e-08 | 361 |
myeloid lineage restricted progenitor cell | 2.28e-07 | 66 |
granulocyte monocyte progenitor cell | 3.22e-07 | 67 |
motile cell | 9.79e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.28e-10 | 98 |
blood island | 9.28e-10 | 98 |
hemolymphoid system | 1.88e-08 | 108 |
connective tissue | 1.88e-07 | 371 |