FFCP PHASE1:Hg19::chr12:54348702..54348715,+: Difference between revisions
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|id=chr12:54348702..54348715,+
|short_description=p2@HOXC12
|description=CAGE_peak_2_at_HOXC12_5end
|association_with_transcript=0bp_to_NM_173860,uc010soq.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3228 | |EntrezGene=3228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5124 | |HGNC=5124 | ||
|TSSclassifier=strong | |||
|UniProt=P31275 | |UniProt=P31275 | ||
|association_with_transcript=0bp_to_NM_173860,uc010soq.1_5end | |||
|cluster_id=chr12:54348702..54348715,+ | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_2_at_HOXC12_5end | |||
|id=chr12:54348702..54348715,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.51e-16!4;CL:0002253!1.54e-14!2;CL:0000515!4.16e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;8.55e-21;4!CL:0002253;2.23e-11;2!CL:1000415;2.73e-11;2!CL:0000214;4.52e-08;3!CL:0002231;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.00e-21,4;CL:0002253,2.23e-11,2;CL:1000415,2.73e-11,2;CL:0000214,4.52e-08,3;CL:0002231,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!3.83e-16!14;DOID:171!1.28e-10!10;DOID:0050687!8.85e-10!143;DOID:178!6.10e-08!1;DOID:326!6.10e-08!1;DOID:3978!6.10e-08!1;DOID:3394!6.10e-08!1;DOID:5844!6.10e-08!1;DOID:162!4.73e-07!235;DOID:14566!8.00e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1115;1.24e-09;20!DOID:171;7.96e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.21e-09,20;DOID:171,8.62e-09,10;DOID:0050687,1.55e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001242!7.51e-16!4;UBERON:0001262!7.51e-16!4;UBERON:0004786!7.51e-16!4;UBERON:0004808!7.51e-16!4;UBERON:0001277!7.51e-16!4;UBERON:0001052!1.01e-15!4;UBERON:0003350!8.72e-13!5;UBERON:0004907!1.11e-12!5;UBERON:0000029!9.10e-08!1;UBERON:0000485!2.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;8.55e-21;4!UBERON:0001262;8.55e-21;4!UBERON:0004786;8.55e-21;4!UBERON:0004808;8.55e-21;4!UBERON:0001277;8.55e-21;4!UBERON:0002346;1.41e-20;4!UBERON:0000923;1.41e-20;4!UBERON:0010316;1.41e-20;4!UBERON:0005291;1.41e-20;4!UBERON:0002050;1.12e-16;5!UBERON:0005423;1.12e-16;5!UBERON:0000485;2.51e-12;7!UBERON:0003929;2.51e-12;7!UBERON:0003350;6.61e-11;8!UBERON:0006915;4.52e-08;3!UBERON:0007616;4.52e-08;3!UBERON:0002217;4.52e-08;3!UBERON:0002018;4.52e-08;3!UBERON:0002110;5.93e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,7.00e-21,4;UBERON:0001262,7.00e-21,4;UBERON:0004786,7.00e-21,4;UBERON:0004808,7.00e-21,4;UBERON:0001277,7.00e-21,4;UBERON:0003350,5.98e-11,8;UBERON:0000485,7.74e-10,9;UBERON:0006915,4.52e-08,3;UBERON:0007616,4.52e-08,3;UBERON:0002217,4.52e-08,3;UBERON:0002018,4.52e-08,3;UBERON:0002110,5.93e-08,3;UBERON:0006242,5.93e-08,3 | |||
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|short_description=p2@HOXC12 | |||
}} | }} |
Latest revision as of 04:10, 19 September 2015
Short description: | p2@HOXC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXC12_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | 0bp_to_NM_173860, uc010soq.1_5end |
EntrezGene: | HOXC12 |
HGNC: | 5124 |
UniProt: | P31275 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.00e-21 | 4 |
epithelial cell of large intestine | 2.23e-11 | 2 |
epithelial cell of gall bladder | 2.73e-11 | 2 |
synovial cell | 4.52e-08 | 3 |
epithelial cell of prostate | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 7.00e-21 | 4 |
wall of intestine | 7.00e-21 | 4 |
gastrointestinal system mucosa | 7.00e-21 | 4 |
gastrointestinal system epithelium | 7.00e-21 | 4 |
intestinal epithelium | 7.00e-21 | 4 |
epithelium of mucosa | 5.98e-11 | 8 |
simple columnar epithelium | 7.74e-10 | 9 |
stratified squamous epithelium | 4.52e-08 | 3 |
layer of synovial tissue | 4.52e-08 | 3 |
synovial joint | 4.52e-08 | 3 |
synovial membrane of synovial joint | 4.52e-08 | 3 |
gallbladder | 5.93e-08 | 3 |
gall bladder primordium | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.21e-09 | 20 |
neuroectodermal tumor | 8.62e-09 | 10 |
cell type cancer | 1.55e-08 | 143 |