FFCP PHASE1:Hg19::chr18:2846820..2846865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:2846820..2846865,+ to FFCP PHASE1:Hg19::chr18:2846820..2846865,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84034 | |EntrezGene=84034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19881 | |HGNC=19881 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXX0 | |UniProt=Q9BXX0 | ||
|association_with_transcript=-162bp_to_ENST00000254528,ENST00000308080,NM_032048,uc002kln.2_5end | |||
|cluster_id=chr18:2846820..2846865,+ | |||
|description=CAGE_peak_5_at_EMILIN2_5end | |||
|id=chr18:2846820..2846865,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.42e-13!180;CL:0000057!5.75e-13!75;CL:0002057!4.93e-09!42;CL:0002620!3.71e-08!23;CL:0000048!6.46e-08!430;CL:0000860!9.37e-08!45;CL:0000557!1.13e-07!71;CL:0000034!1.32e-07!444;CL:0000839!1.54e-07!70;CL:0002334!2.12e-07!12;CL:0000723!3.14e-07!436;CL:0002194!9.86e-07!63;CL:0000576!9.86e-07!63;CL:0000040!9.86e-07!63;CL:0000559!9.86e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.78e-14;19!CL:0002620;1.24e-11;23!CL:0000860;1.07e-09;33!CL:0002057;1.07e-09;33!CL:0000473;1.77e-08;39!CL:0000234;1.77e-08;39!CL:0002494;5.44e-07;16!CL:0002577;6.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.62e-14,19;CL:0002620,1.13e-11,23;CL:0000057,4.35e-10,76;CL:0000048,8.75e-09,427;CL:0000723,2.27e-08,433;CL:0000034,3.13e-08,441;CL:0000473,9.27e-08,48;CL:0000234,9.27e-08,48;CL:0000860,1.59e-07,42;CL:0002057,1.59e-07,42;CL:0002577,6.43e-07,3;CL:0002494,6.44e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.87e-12!167;UBERON:0000468!2.67e-09!659;UBERON:0005631!3.60e-09!14;UBERON:0000158!3.60e-09!14;UBERON:0004290!6.02e-09!70;UBERON:0004923!5.67e-08!57;UBERON:0007100!8.21e-08!27;UBERON:0000914!8.78e-08!83;UBERON:0002329!8.78e-08!83;UBERON:0003077!8.78e-08!83;UBERON:0003059!8.78e-08!83;UBERON:0007282!8.78e-08!83;UBERON:0009618!8.78e-08!83;UBERON:0007285!8.78e-08!83;UBERON:0000062!1.33e-07!511;UBERON:0003124!1.81e-07!7;UBERON:0000948!3.28e-07!24;UBERON:0005498!3.28e-07!24;UBERON:0004140!3.28e-07!24;UBERON:0009881!3.28e-07!24;UBERON:0004141!3.28e-07!24;UBERON:0003084!3.28e-07!24;UBERON:0007005!3.28e-07!24;UBERON:0004139!3.28e-07!24;UBERON:0004291!3.28e-07!24;UBERON:0002385!4.22e-07!63;UBERON:0001015!4.22e-07!63;UBERON:0000383!4.22e-07!63;UBERON:0000486!5.58e-07!82;UBERON:0001134!8.02e-07!61;UBERON:0002036!8.02e-07!61;UBERON:0003082!8.02e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.30e-14;24!UBERON:0005631;3.93e-11;10!UBERON:0000158;3.93e-11;10!UBERON:0001987;1.45e-08;4!UBERON:0000305;8.10e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.58e-18,14;UBERON:0000158,7.58e-18,14;UBERON:0000478,3.04e-14,24;UBERON:0003124,3.07e-13,7;UBERON:0000926,6.24e-10,315;UBERON:0004120,6.24e-10,315;UBERON:0006603,6.24e-10,315;UBERON:0004923,6.60e-09,66;UBERON:0001987,1.27e-08,4;UBERON:0004340,1.27e-08,4;UBERON:0002199,2.06e-07,46;UBERON:0002416,2.06e-07,46;UBERON:0000305,7.52e-07,7;UBERON:0002097,7.71e-07,41 | |||
|phase1_expression=1.45342703416445,1.71280419112787,0.845726424575827,0,0.446961094427288,0.872338524100369,0,0,1.82829939739887,0,0,16.1646615376327,3.69273769519835,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0.816002764977012,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0.32389366601898,0.515151135268373,0.436194716338694,0.377875943688809,0.242584061187816,1.16214518452842,2.05583944010913,0.929119112685311,0.863077176966451,1.2808035326455,1.6553756092201,1.03423704220986,0,0,0.752969358170419,0.545812300115692,0.449446968890169,0.918251677112708,0.641858054152187,1.27867425159808,1.64925650093358,3.59034583718937,1.27867425159808,3.77272010217159,1.70215567407342,4.35975574296902,1.50749199154046,2.08593167368081,1.73751075764093,1.81619850790011,4.05105399586321,1.26584954976354,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,2.55725123687061,0,1.00267582127178,0.434539556882471,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0,2.29469296599051,0,4.48542080113846,1.06748995729705,0.98667019366864,1.55605517699883,2.02066008104532,0.163461903113459,0,0,2.10889288650417,2.18512053781224,0,0.448346041655403,2.46612447151906,3.56120477609889,2.94946694074722,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0.841680569770331,0.875829639103749,0,0,0.30648779579902,0,0.340296549480063,10.404598869954,1.92201649936711,0,4.80145753735044,1.13357782162283,1.03056216018252,0.558350568994769,0.506328996723799,0.292311015483596,8.83518209854401,2.02509777013059,0,9.23024940543197,2.72030665214629,2.7129694769678,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,1.00928340350251,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,4.5273141246454,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,1.05667824812239,0,0,0,0,0,0.246217006087397,0.468008530278475,1.63494278517601,0,0,0,0,0,0.383382679165211,0.985326475791887,0.44024217006613,1.03664057770386,0.720599767084807,0.37872730027914,0,0,0,0,0.102827492703324,0,0,1.34557301214433,2.61576041299968,0.95339771567235,0,3.57656445851882,0.845302752556,0,0,0,0,0,0,0,0,1.62868092146868,0.355391948742546,0,0.602878754119172,0,0,1.2162378064119,0,0,3.35474797688216,1.14861935834114,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,1.65078867489357,0.783204629850962,2.05886054286514,0,0,0,9.09382714338778,4.99306318531491,19.6553690664292,0.744323423456331,0.61384789315225,0.841980283299221,2.43464383585832,1.02341449813341,1.12597744800525,2.96836132889982,0.925258162815933,1.59805552781814,0.821271560138091,0.519254429183621,1.51073491997947,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0.773365746336976,0.462145851343933,0.614014698904518,1.92971201478343,0.859361958946189,3.0453505721988,2.30111894023472,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0.190630193923825,0.767693373934002,2.56763392820352,2.22742273548156,0,0.539617372749944,1.64722217841633,0.706874414074119,0,0,0.421258456238981,0.48763373908959,0,0,0.682499557039929,1.41405431953713,2.26016233240486,1.65409603063837,0,0,2.31510213706675,4.59126326432643,0,0,0,0.286822704408103,0.196498082026242,0.35667105148125,1.06428319221179,1.68886108238131,5.92730807327823,1.13841952129715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,4.29740072527842,3.8605408508243,3.68592842519078,0,0.422008249231538,0,0,0,1.19548792950642,0,0,2.14764233254525,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,1.53900517007594,0.797594390929008,9.91424788868659,5.83424688663519,7.60531603454057,7.33702667383415,1.55715908783166,21.3213910407454,0,0,0,0,0,0,0,0,0,0,2.54435528581093,0,0,0.973033209536731,0,0,0,0,0.134802265961354,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.821425535170343,0.300646838828985,0,0,0,0,0,2.56148591426813,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,0.223171457441873,4.43410918412393,0,0,0,0,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| 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| ||
|short_description=p5@EMILIN2 | |||
}} | }} |
Latest revision as of 04:14, 19 September 2015
Short description: | p5@EMILIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EMILIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -162bp_to_ENST00000254528, ENST00000308080, NM_032048, uc002kln.2_5end |
EntrezGene: | EMILIN2 |
HGNC: | 19881 |
UniProt: | Q9BXX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.62e-14 | 19 |
skin fibroblast | 1.13e-11 | 23 |
fibroblast | 4.35e-10 | 76 |
multi fate stem cell | 8.75e-09 | 427 |
somatic stem cell | 2.27e-08 | 433 |
stem cell | 3.13e-08 | 441 |
defensive cell | 9.27e-08 | 48 |
phagocyte | 9.27e-08 | 48 |
classical monocyte | 1.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-07 | 42 |
placental epithelial cell | 6.43e-07 | 3 |
cardiocyte | 6.44e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.58e-18 | 14 |
membranous layer | 7.58e-18 | 14 |
extraembryonic structure | 3.04e-14 | 24 |
chorion | 3.07e-13 | 7 |
mesoderm | 6.24e-10 | 315 |
mesoderm-derived structure | 6.24e-10 | 315 |
presumptive mesoderm | 6.24e-10 | 315 |
organ component layer | 6.60e-09 | 66 |
placenta | 1.27e-08 | 4 |
allantois | 1.27e-08 | 4 |
integument | 2.06e-07 | 46 |
integumental system | 2.06e-07 | 46 |
amnion | 7.52e-07 | 7 |
skin of body | 7.71e-07 | 41 |