FFCP PHASE1:Hg19::chr8:80976809..80976829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7163 | |EntrezGene=7163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |HGNC=12005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003ybq.1,uc003ybu.1_5end | |association_with_transcript=0bp_to_uc003ybq.1,uc003ybu.1_5end | ||
|cluster_id=chr8:80976809..80976829,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_16_at_TPD52_5end | |description=CAGE_peak_16_at_TPD52_5end | ||
|id=chr8:80976809..80976829,- | |id=chr8:80976809..80976829,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.60e-14;3 | |||
|ontology_enrichment_disease=DOID:305!1.28e-08!106;DOID:0050687!4.00e-08!143;DOID:162!7.33e-08!235;DOID:14566!2.14e-07!239;DOID:1325!2.65e-07!7;DOID:3904!2.65e-07!7 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.79e-11!41;UBERON:0001890!5.79e-11!41;UBERON:0006240!5.79e-11!41;UBERON:0003080!1.45e-10!42;UBERON:0005743!8.45e-10!86;UBERON:0003056!9.53e-10!61;UBERON:0002346!1.40e-09!90;UBERON:0000955!2.47e-09!69;UBERON:0006238!2.47e-09!69;UBERON:0001049!5.63e-09!57;UBERON:0005068!5.63e-09!57;UBERON:0006241!5.63e-09!57;UBERON:0007135!5.63e-09!57;UBERON:0003075!6.69e-09!86;UBERON:0007284!6.69e-09!86;UBERON:0001017!7.47e-09!82;UBERON:0000073!7.88e-09!94;UBERON:0001016!7.88e-09!94;UBERON:0007023!6.51e-08!115;UBERON:0002616!1.71e-07!59;UBERON:0001893!2.01e-07!34;UBERON:0002791!7.27e-07!33;UBERON:0002020!8.85e-07!34;UBERON:0003528!8.85e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0002368;8.79e-11;33!UBERON:0000949;9.23e-10;43!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24!UBERON:0002530;4.71e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0002368,5.12e-11,35;UBERON:0000949,9.62e-09,45;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24;UBERON:0002530,7.68e-07,59 | |||
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| ||
|short_description=p16@TPD52 | |short_description=p16@TPD52 | ||
}} | }} |
Latest revision as of 04:28, 19 September 2015
Short description: | p16@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TPD52_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_uc003ybq.1, uc003ybu.1_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
endocrine gland | 5.12e-11 | 35 |
endocrine system | 9.62e-09 | 45 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |
gland | 7.68e-07 | 59 |