FFCP PHASE1:Hg19::chr8:80976809..80976829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7163 | |EntrezGene=7163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |HGNC=12005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003ybq.1,uc003ybu.1_5end | |||
|cluster_id=chr8:80976809..80976829,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_16_at_TPD52_5end | |||
|id=chr8:80976809..80976829,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.60e-14;3 | |||
|ontology_enrichment_disease=DOID:305!1.28e-08!106;DOID:0050687!4.00e-08!143;DOID:162!7.33e-08!235;DOID:14566!2.14e-07!239;DOID:1325!2.65e-07!7;DOID:3904!2.65e-07!7 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.79e-11!41;UBERON:0001890!5.79e-11!41;UBERON:0006240!5.79e-11!41;UBERON:0003080!1.45e-10!42;UBERON:0005743!8.45e-10!86;UBERON:0003056!9.53e-10!61;UBERON:0002346!1.40e-09!90;UBERON:0000955!2.47e-09!69;UBERON:0006238!2.47e-09!69;UBERON:0001049!5.63e-09!57;UBERON:0005068!5.63e-09!57;UBERON:0006241!5.63e-09!57;UBERON:0007135!5.63e-09!57;UBERON:0003075!6.69e-09!86;UBERON:0007284!6.69e-09!86;UBERON:0001017!7.47e-09!82;UBERON:0000073!7.88e-09!94;UBERON:0001016!7.88e-09!94;UBERON:0007023!6.51e-08!115;UBERON:0002616!1.71e-07!59;UBERON:0001893!2.01e-07!34;UBERON:0002791!7.27e-07!33;UBERON:0002020!8.85e-07!34;UBERON:0003528!8.85e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0002368;8.79e-11;33!UBERON:0000949;9.23e-10;43!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24!UBERON:0002530;4.71e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0002368,5.12e-11,35;UBERON:0000949,9.62e-09,45;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24;UBERON:0002530,7.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0,0.435758888184812,0.474541238222193,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.371072392647405,0,0.520855522170466,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0.583209226766509,0,0.885741385813839,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0.193978032976839,0,10.621094816685,0.137041924646751,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0.795229689809303,0,0,0.137539436597234,0,0,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0.830091809617385,0.124980407962107,0,0,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0.194860308839388,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0.255788742607303,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.82046545696302,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,13.9282477328355,16.1416186665036,0.606965604236632,0,0.177404740325278,0,0,0,0.131545547125698,0,0.222462803784138,0.078493092850514,0.157115589916002,0.280272163313789,0.913158720509496,0,0,12.5083952309149,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0.237840181555137,0.11294608203896,0.219881033490858,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0.594092800654172,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0.218531143927391,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0.404234377916439,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 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| ||
|short_description=p16@TPD52 | |||
}} | }} |
Latest revision as of 04:28, 19 September 2015
Short description: | p16@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TPD52_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_uc003ybq.1, uc003ybu.1_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
endocrine gland | 5.12e-11 | 35 |
endocrine system | 9.62e-09 | 45 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |
gland | 7.68e-07 | 59 |