FFCP PHASE1:Hg19::chr12:54426831..54426836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3222 | |EntrezGene=3222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5127 | |HGNC=5127 | ||
|TSSclassifier=strong | |||
|UniProt=Q00444 | |UniProt=Q00444 | ||
|association_with_transcript=0bp_to_NM_018953,uc001sew.2_5end | |association_with_transcript=0bp_to_NM_018953,uc001sew.2_5end | ||
|cluster_id=chr12:54426831..54426836,+ | |||
|description=CAGE_peak_10_at_HOXC5_5end | |description=CAGE_peak_10_at_HOXC5_5end | ||
|id=chr12:54426831..54426836,+ | |id=chr12:54426831..54426836,+ | ||
|ontology_enrichment_celltype=CL:0002570!2.72e-11!8;CL:0002334!5.96e-09!12;CL:0000055!5.69e-08!180;CL:0000188!6.21e-08!9;CL:0002580!9.71e-07!3 | |ontology_enrichment_celltype=CL:0002570!2.72e-11!8;CL:0002334!5.96e-09!12;CL:0000055!5.69e-08!180;CL:0000188!6.21e-08!9;CL:0002580!9.71e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002617;4.47e-18;2!CL:0002580;2.25e-12;3!CL:0002570;1.52e-10;8!CL:0000062;2.99e-09;9!CL:0002334;4.69e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,5.34e-18,2;CL:0002580,1.78e-12,3;CL:0002570,1.42e-10,8;CL:0000136,1.94e-09,15;CL:0000062,1.40e-07,11;CL:0000375,1.40e-07,11;CL:0000335,1.40e-07,11;CL:0002334,4.18e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000335;1.18e-07;11 | |||
|ontology_enrichment_disease=DOID:2394!3.67e-08!14 | |ontology_enrichment_disease=DOID:2394!3.67e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.99e-07!14 | |ontology_enrichment_uberon=UBERON:0001013!1.99e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001443;1.49e-19;11!UBERON:0000310;6.48e-14;10!UBERON:0002426;1.80e-10;1!UBERON:0003831;1.80e-10;1!UBERON:0003898;1.80e-10;1!UBERON:0004830;1.80e-10;1!UBERON:0003830;1.80e-10;1!UBERON:0005175;1.80e-10;1!UBERON:0001774;1.80e-10;1!UBERON:0001103;1.80e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,1.44e-19,11;UBERON:0000310,6.07e-14,10;UBERON:0002426,1.98e-10,1;UBERON:0003831,1.98e-10,1;UBERON:0003898,1.98e-10,1;UBERON:0004830,1.98e-10,1;UBERON:0003830,1.98e-10,1;UBERON:0005175,1.98e-10,1;UBERON:0001774,1.98e-10,1;UBERON:0001103,1.98e-10,1;UBERON:0010084,1.98e-10,1;UBERON:0000915,2.19e-07,52 | |||
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|phase1_expression=1.45342703416445,1.07050261945492,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,1.23766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0.561803226808994,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,2.94017422771084,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.387815147273333,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.977208552881205,0,2.37585561880029,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0,0,0,0,1.20378439891088,2.27407504055985,1.03473071292505,0,0.737476674166813,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,1.07423381301644,1.96462066103151,0,0,0.482561763430822,0,0.616838775210622,0.355123450626254,2.54594183642808,0,0.697262270759755,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.614014698904518,0.413509717453592,0.429680979473094,0.145016693914229,0.340906509664404,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0.522109747527277,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,1.798532254171,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0,0.159296767163702,0,0.310525913752519,3.7323558705677,0,1.5652351854352,0.150257608997218,0.380805212168795,0,0.181848659202559,0.429642228169954,0.464033759878494,0,0,2.06037423109676,1.6837474438296,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0.255788742607303,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0,2.33152017882697,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,1.1598144313382,0.485710993059139,0.233939463462106,0,0,1.58124514854544,0.769583617218004,0,1.00326405540328,0.655678681511872,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p10@HOXC5 | |short_description=p10@HOXC5 | ||
}} | }} |
Latest revision as of 04:59, 19 September 2015
Short description: | p10@HOXC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOXC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_018953, uc001sew.2_5end |
EntrezGene: | HOXC5 |
HGNC: | 5127 |
UniProt: | Q00444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 5.34e-18 | 2 |
preadipocyte of the breast | 1.78e-12 | 3 |
mesenchymal stem cell of adipose | 1.42e-10 | 8 |
fat cell | 1.94e-09 | 15 |
osteoblast | 1.40e-07 | 11 |
osteoprogenitor cell | 1.40e-07 | 11 |
mesenchyme condensation cell | 1.40e-07 | 11 |
preadipocyte | 4.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chest | 1.44e-19 | 11 |
breast | 6.07e-14 | 10 |
chest muscle | 1.98e-10 | 1 |
respiratory system muscle | 1.98e-10 | 1 |
skeletal muscle of trunk | 1.98e-10 | 1 |
respiratory system skeletal muscle | 1.98e-10 | 1 |
thoracic segment muscle | 1.98e-10 | 1 |
chest organ | 1.98e-10 | 1 |
muscle of trunk | 1.98e-10 | 1 |
diaphragm | 1.98e-10 | 1 |
future diaphragm | 1.98e-10 | 1 |
thoracic segment of trunk | 2.19e-07 | 52 |