FFCP PHASE1:Hg19::chr3:100211600..100211628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55076 | |EntrezGene=55076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25480 | |HGNC=25480 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9Z5 | |UniProt=C9J9Z5 | ||
|association_with_transcript=96bp_to_ENST00000449609_5end | |association_with_transcript=96bp_to_ENST00000449609_5end | ||
|cluster_id=chr3:100211600..100211628,+ | |||
|coexpression_cluster_id=C4255 | |coexpression_cluster_id=C4255 | ||
|description=CAGE_peak_4_at_TMEM45A_5end | |description=CAGE_peak_4_at_TMEM45A_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000680!2.55e-12!57;CL:0000056!2.55e-12!57;CL:0000355!2.55e-12!57;CL:0000192!1.09e-11!42;CL:0000514!1.09e-11!42;CL:0000187!3.55e-11!54;CL:0000057!1.68e-10!75;CL:0000183!2.89e-10!59;CL:0000359!3.05e-10!32;CL:0000393!5.93e-10!60;CL:0000211!5.93e-10!60 | |ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000680!2.55e-12!57;CL:0000056!2.55e-12!57;CL:0000355!2.55e-12!57;CL:0000192!1.09e-11!42;CL:0000514!1.09e-11!42;CL:0000187!3.55e-11!54;CL:0000057!1.68e-10!75;CL:0000183!2.89e-10!59;CL:0000359!3.05e-10!32;CL:0000393!5.93e-10!60;CL:0000211!5.93e-10!60 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.75e-12;55!CL:0000048;7.28e-11;58!CL:0000723;1.04e-10;61!CL:0000359;1.28e-10;32!CL:0000192;3.25e-09;43!CL:0000034;3.71e-08;69!CL:0000349;6.09e-07;19 | |ontology_enrichment_celltype_v019=CL:0000134;3.75e-12;55!CL:0000048;7.28e-11;58!CL:0000723;1.04e-10;61!CL:0000359;1.28e-10;32!CL:0000192;3.25e-09;43!CL:0000034;3.71e-08;69!CL:0000349;6.09e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.95e-12,43;CL:0000514,3.95e-12,43;CL:0000680,1.49e-11,58;CL:0000056,1.49e-11,58;CL:0000355,1.49e-11,58;CL:0000359,5.63e-11,32;CL:0000048,2.39e-10,427;CL:0000723,2.59e-10,433;CL:0000187,3.65e-10,55;CL:0000034,4.62e-10,441;CL:0000057,1.28e-09,76;CL:0000393,4.12e-08,61;CL:0000211,4.12e-08,61;CL:0000349,8.82e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;3.25e-09;43 | |ontology_enrichment_development_v019=CL:0000514;3.25e-09;43 | ||
|ontology_enrichment_disease=DOID:2394!1.75e-08!14 | |ontology_enrichment_disease=DOID:2394!1.75e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.62e-11;14 | |ontology_enrichment_disease_v019=DOID:2394;1.62e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.61e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.38e-13!83;UBERON:0002329!2.38e-13!83;UBERON:0003077!2.38e-13!83;UBERON:0003059!2.38e-13!83;UBERON:0007282!2.38e-13!83;UBERON:0009618!2.38e-13!83;UBERON:0007285!2.38e-13!83;UBERON:0004290!2.18e-12!70;UBERON:0002100!1.31e-11!216;UBERON:0005256!1.95e-11!143;UBERON:0001134!2.29e-11!61;UBERON:0002036!2.29e-11!61;UBERON:0003082!2.29e-11!61;UBERON:0002385!3.04e-11!63;UBERON:0001015!3.04e-11!63;UBERON:0000383!3.04e-11!63;UBERON:0000486!1.30e-10!82;UBERON:0003104!1.05e-09!238;UBERON:0009142!1.05e-09!238;UBERON:0004872!1.20e-09!84;UBERON:0001637!4.31e-09!42;UBERON:0003509!4.31e-09!42;UBERON:0004572!4.31e-09!42;UBERON:0004573!2.55e-08!33;UBERON:0004571!2.55e-08!33;UBERON:0003102!2.93e-08!95;UBERON:0002199!4.95e-08!45;UBERON:0002416!4.95e-08!45;UBERON:0000475!5.87e-08!365;UBERON:0005631!1.31e-07!14;UBERON:0000158!1.31e-07!14;UBERON:0000468!4.96e-07!659;UBERON:0002097!7.35e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!2.38e-13!83;UBERON:0002329!2.38e-13!83;UBERON:0003077!2.38e-13!83;UBERON:0003059!2.38e-13!83;UBERON:0007282!2.38e-13!83;UBERON:0009618!2.38e-13!83;UBERON:0007285!2.38e-13!83;UBERON:0004290!2.18e-12!70;UBERON:0002100!1.31e-11!216;UBERON:0005256!1.95e-11!143;UBERON:0001134!2.29e-11!61;UBERON:0002036!2.29e-11!61;UBERON:0003082!2.29e-11!61;UBERON:0002385!3.04e-11!63;UBERON:0001015!3.04e-11!63;UBERON:0000383!3.04e-11!63;UBERON:0000486!1.30e-10!82;UBERON:0003104!1.05e-09!238;UBERON:0009142!1.05e-09!238;UBERON:0004872!1.20e-09!84;UBERON:0001637!4.31e-09!42;UBERON:0003509!4.31e-09!42;UBERON:0004572!4.31e-09!42;UBERON:0004573!2.55e-08!33;UBERON:0004571!2.55e-08!33;UBERON:0003102!2.93e-08!95;UBERON:0002199!4.95e-08!45;UBERON:0002416!4.95e-08!45;UBERON:0000475!5.87e-08!365;UBERON:0005631!1.31e-07!14;UBERON:0000158!1.31e-07!14;UBERON:0000468!4.96e-07!659;UBERON:0002097!7.35e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-08;9!UBERON:0001557;1.96e-08;9!UBERON:0004573;2.08e-08;33!UBERON:0004571;2.08e-08;33!UBERON:0005631;7.54e-08;10!UBERON:0000158;7.54e-08;10!UBERON:0001637;3.63e-07;42!UBERON:0003509;3.63e-07;42!UBERON:0004572;3.63e-07;42!UBERON:0001013;6.73e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-08;9!UBERON:0001557;1.96e-08;9!UBERON:0004573;2.08e-08;33!UBERON:0004571;2.08e-08;33!UBERON:0005631;7.54e-08;10!UBERON:0000158;7.54e-08;10!UBERON:0001637;3.63e-07;42!UBERON:0003509;3.63e-07;42!UBERON:0004572;3.63e-07;42!UBERON:0001013;6.73e-07;14 | ||
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| ||
|short_description=p4@TMEM45A | |short_description=p4@TMEM45A | ||
}} | }} |
Latest revision as of 05:13, 19 September 2015
Short description: | p4@TMEM45A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM45A_5end |
Coexpression cluster: | C4255_Adipocyte_amniotic_Smooth_Chondrocyte_chorionic_Ewing_Preadipocyte |
Association with transcript: | 96bp_to_ENST00000449609_5end |
EntrezGene: | TMEM45A |
HGNC: | 25480 |
UniProt: | C9J9Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.95e-12 | 43 |
smooth muscle myoblast | 3.95e-12 | 43 |
muscle precursor cell | 1.49e-11 | 58 |
myoblast | 1.49e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.49e-11 | 58 |
vascular associated smooth muscle cell | 5.63e-11 | 32 |
multi fate stem cell | 2.39e-10 | 427 |
somatic stem cell | 2.59e-10 | 433 |
muscle cell | 3.65e-10 | 55 |
stem cell | 4.62e-10 | 441 |
fibroblast | 1.28e-09 | 76 |
electrically responsive cell | 4.12e-08 | 61 |
electrically active cell | 4.12e-08 | 61 |
extraembryonic cell | 8.82e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
artery | 9.42e-11 | 42 |
arterial blood vessel | 9.42e-11 | 42 |
arterial system | 9.42e-11 | 42 |
trunk mesenchyme | 4.37e-10 | 122 |
skeletal muscle tissue | 5.01e-10 | 62 |
striated muscle tissue | 5.01e-10 | 62 |
myotome | 5.01e-10 | 62 |
extraembryonic membrane | 6.72e-10 | 14 |
membranous layer | 6.72e-10 | 14 |
dense mesenchyme tissue | 1.34e-09 | 73 |
somite | 1.58e-09 | 71 |
presomitic mesoderm | 1.58e-09 | 71 |
presumptive segmental plate | 1.58e-09 | 71 |
dermomyotome | 1.58e-09 | 71 |
trunk paraxial mesoderm | 1.58e-09 | 71 |
splanchnic layer of lateral plate mesoderm | 1.67e-09 | 83 |
systemic artery | 1.82e-09 | 33 |
systemic arterial system | 1.82e-09 | 33 |
muscle tissue | 2.39e-09 | 64 |
musculature | 2.39e-09 | 64 |
musculature of body | 2.39e-09 | 64 |
paraxial mesoderm | 3.18e-09 | 72 |
presumptive paraxial mesoderm | 3.18e-09 | 72 |
larynx | 1.80e-08 | 9 |
multilaminar epithelium | 6.78e-08 | 83 |
epithelial vesicle | 1.33e-07 | 78 |
mesenchyme | 5.19e-07 | 160 |
entire embryonic mesenchyme | 5.19e-07 | 160 |
integument | 6.11e-07 | 46 |
integumental system | 6.11e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.61e-11 | 14 |