FFCP PHASE1:Hg19::chr18:29172846..29172875,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7276 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12405 | |||
|TSSclassifier=strong | |||
|UniProt=P02766 | |||
|association_with_transcript=-2bp_to_M11714_5end | |||
|cluster_id=chr18:29172846..29172875,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_4_at_TTR_5end | |||
|id=chr18:29172846..29172875,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.57e-10!12;CL:0000417!1.57e-10!12;CL:0000668!1.57e-10!12;CL:0000414!1.57e-10!12;CL:0000412!1.57e-10!12;CL:0000182!1.57e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.66e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.21e-16!3;UBERON:0005290!1.21e-16!3;UBERON:0010096!1.21e-16!3;UBERON:0005743!1.83e-16!86;UBERON:0007023!1.06e-14!115;UBERON:0000073!1.52e-14!94;UBERON:0001016!1.52e-14!94;UBERON:0001017!1.29e-13!82;UBERON:0000955!9.10e-13!69;UBERON:0006238!9.10e-13!69;UBERON:0002107!1.71e-12!19;UBERON:0006925!1.71e-12!19;UBERON:0008836!1.71e-12!19;UBERON:0001049!4.98e-12!57;UBERON:0005068!4.98e-12!57;UBERON:0006241!4.98e-12!57;UBERON:0007135!4.98e-12!57;UBERON:0009497!6.26e-12!25;UBERON:0000015!6.26e-12!25;UBERON:0002423!6.26e-12!25;UBERON:0006235!6.26e-12!25;UBERON:0004161!6.26e-12!25;UBERON:0001905!1.24e-11!2;UBERON:0002757!1.24e-11!2;UBERON:0010134!1.24e-11!2;UBERON:0002784!1.24e-11!2;UBERON:0005408!1.24e-11!2;UBERON:0001899!1.24e-11!2;UBERON:0002616!1.54e-11!59;UBERON:0003075!2.06e-11!86;UBERON:0007284!2.06e-11!86;UBERON:0002346!9.24e-11!90;UBERON:0008835!1.16e-10!22;UBERON:0003894!1.16e-10!22;UBERON:0004733!1.48e-10!12;UBERON:0002028!1.48e-10!12;UBERON:0007277!1.48e-10!12;UBERON:0002298!1.54e-10!8;UBERON:0002368!1.71e-10!35;UBERON:0009854!3.72e-10!23;UBERON:0004732!1.01e-09!13;UBERON:0000949!1.19e-09!45;UBERON:0007499!2.88e-09!25;UBERON:0005057!7.10e-09!26;UBERON:0009856!7.10e-09!26;UBERON:0003076!2.17e-08!15;UBERON:0003057!2.17e-08!15;UBERON:0000033!5.91e-08!123;UBERON:0003929!1.28e-07!54;UBERON:0000153!1.98e-07!129;UBERON:0007811!1.98e-07!129;UBERON:0002365!2.72e-07!31;UBERON:0002330!2.72e-07!31;UBERON:0001894!3.24e-07!7;UBERON:0006222!3.24e-07!7;UBERON:0002530!6.46e-07!59;UBERON:0000025!7.91e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.86e-19;2!UBERON:0002757;2.86e-19;2!UBERON:0010134;2.86e-19;2!UBERON:0005408;2.86e-19;2!UBERON:0001899;2.86e-19;2!UBERON:0001896;1.25e-13;3!UBERON:0005290;1.25e-13;3!UBERON:0002107;4.62e-12;19!UBERON:0006925;4.62e-12;19!UBERON:0002368;1.69e-11;33!UBERON:0002336;2.39e-10;1!UBERON:0011215;2.39e-10;1!UBERON:0001018;2.39e-10;1!UBERON:0002473;2.39e-10;1!UBERON:0005340;2.39e-10;1!UBERON:0003544;2.39e-10;1!UBERON:0005970;2.39e-10;1!UBERON:0002316;2.39e-10;1!UBERON:0001020;2.39e-10;1!UBERON:0002437;2.39e-10;1!UBERON:0003296;4.15e-10;4!UBERON:0010133;4.15e-10;4!UBERON:0002784;4.15e-10;4!UBERON:0002423;3.95e-09;25!UBERON:0000949;4.31e-09;43!UBERON:0004733;1.70e-07;12!UBERON:0002028;1.70e-07;12!UBERON:0002365;2.49e-07;31!UBERON:0002330;2.49e-07;31!UBERON:0002298;3.04e-07;6!UBERON:0004732;5.92e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.61e-19,2;UBERON:0002757,2.61e-19,2;UBERON:0010134,2.61e-19,2;UBERON:0005408,2.61e-19,2;UBERON:0001899,2.61e-19,2;UBERON:0001896,1.25e-13,3;UBERON:0005290,1.25e-13,3;UBERON:0010096,1.25e-13,3;UBERON:0002368,3.64e-12,35;UBERON:0002107,4.84e-12,19;UBERON:0006925,4.84e-12,19;UBERON:0008836,4.84e-12,19;UBERON:0008835,2.22e-10,22;UBERON:0003894,2.22e-10,22;UBERON:0002336,2.28e-10,1;UBERON:0011215,2.28e-10,1;UBERON:0001018,2.28e-10,1;UBERON:0002473,2.28e-10,1;UBERON:0005340,2.28e-10,1;UBERON:0003544,2.28e-10,1;UBERON:0005970,2.28e-10,1;UBERON:0002316,2.28e-10,1;UBERON:0001020,2.28e-10,1;UBERON:0002437,2.28e-10,1;UBERON:0003296,3.97e-10,4;UBERON:0010133,3.97e-10,4;UBERON:0002784,3.97e-10,4;UBERON:0009854,6.38e-10,23;UBERON:0007023,1.55e-09,114;UBERON:0001017,1.89e-09,81;UBERON:0000949,2.69e-09,45;UBERON:0000955,3.14e-09,68;UBERON:0006238,3.14e-09,68;UBERON:0007499,4.09e-09,25;UBERON:0009497,4.09e-09,25;UBERON:0000015,4.09e-09,25;UBERON:0002423,4.09e-09,25;UBERON:0006235,4.09e-09,25;UBERON:0004161,4.09e-09,25;UBERON:0011216,8.75e-09,223;UBERON:0009856,9.31e-09,26;UBERON:0001016,2.23e-08,89;UBERON:0000073,1.42e-07,53;UBERON:0002616,1.42e-07,53;UBERON:0004733,1.74e-07,12;UBERON:0002028,1.74e-07,12;UBERON:0007277,1.74e-07,12;UBERON:0002365,2.58e-07,31;UBERON:0002330,2.58e-07,31;UBERON:0002298,3.04e-07,6;UBERON:0001049,3.89e-07,56;UBERON:0005068,3.89e-07,56;UBERON:0006241,3.89e-07,56;UBERON:0007135,3.89e-07,56;UBERON:0004732,6.05e-07,13;UBERON:0002530,6.54e-07,59 | |||
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|short_description=p4@TTR | |||
}} |
Latest revision as of 05:13, 19 September 2015
Short description: | p4@TTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TTR_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -2bp_to_M11714_5end |
EntrezGene: | TTR |
HGNC: | 12405 |
UniProt: | P02766 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.66e-07 | 12 |