FFCP PHASE1:Hg19::chr10:73975426..73975451,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=119504 | |EntrezGene=119504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26976 | |HGNC=26976 | ||
|TSSclassifier=strong | |||
|UniProt=C5H3H2,Q96DE5 | |UniProt=C5H3H2,Q96DE5 | ||
|association_with_transcript=-306bp_to_NM_001242546,NM_001242547,NM_001242548,NM_173473,NR_038391,NR_038392_5end | |association_with_transcript=-306bp_to_NM_001242546,NM_001242547,NM_001242548,NM_173473,NR_038391,NR_038392_5end | ||
|cluster_id=chr10:73975426..73975451,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_ANAPC16_5end | |description=CAGE_peak_3_at_ANAPC16_5end | ||
|id=chr10:73975426..73975451,+ | |id=chr10:73975426..73975451,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.08e-35!18;CL:0000789!2.08e-35!18;CL:0002420!2.08e-35!18;CL:0002419!2.08e-35!18;CL:0000790!2.08e-35!18;CL:0000084!3.42e-33!25;CL:0000827!3.42e-33!25;CL:0000625!5.48e-25!11;CL:0000838!2.56e-19!52;CL:0000542!8.11e-19!53;CL:0000051!8.11e-19!53;CL:0000738!2.22e-15!140;CL:0000624!2.03e-14!6;CL:0002087!2.21e-14!119;CL:0000037!1.59e-10!172;CL:0000566!1.59e-10!172;CL:0002031!1.91e-10!124;CL:0000988!2.19e-09!182;CL:0002032!2.67e-08!165;CL:0000837!2.67e-08!165;CL:0000898!4.72e-08!3;CL:0000842!4.94e-08!3;CL:0000623!1.56e-07!3;CL:0000825!1.56e-07!3;CL:0000767!6.17e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.08e-35!18;CL:0000789!2.08e-35!18;CL:0002420!2.08e-35!18;CL:0002419!2.08e-35!18;CL:0000790!2.08e-35!18;CL:0000084!3.42e-33!25;CL:0000827!3.42e-33!25;CL:0000625!5.48e-25!11;CL:0000838!2.56e-19!52;CL:0000542!8.11e-19!53;CL:0000051!8.11e-19!53;CL:0000738!2.22e-15!140;CL:0000624!2.03e-14!6;CL:0002087!2.21e-14!119;CL:0000037!1.59e-10!172;CL:0000566!1.59e-10!172;CL:0002031!1.91e-10!124;CL:0000988!2.19e-09!182;CL:0002032!2.67e-08!165;CL:0000837!2.67e-08!165;CL:0000898!4.72e-08!3;CL:0000842!4.94e-08!3;CL:0000623!1.56e-07!3;CL:0000825!1.56e-07!3;CL:0000767!6.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.27e-66;18!CL:0000789;4.27e-66;18!CL:0002419;4.27e-66;18!CL:0000625;1.89e-55;11!CL:0000084;8.64e-54;25!CL:0000226;1.99e-19;3!CL:0000842;1.99e-19;3!CL:0000624;1.74e-17;6!CL:0000542;6.76e-17;53!CL:0000898;1.84e-09;3!CL:0000895;1.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.66e-66,18;CL:0000789,2.66e-66,18;CL:0002420,2.66e-66,18;CL:0002419,2.66e-66,18;CL:0000790,2.66e-66,18;CL:0000625,1.86e-55,11;CL:0000084,5.16e-54,25;CL:0000827,5.16e-54,25;CL:0000838,8.03e-28,52;CL:0000542,3.10e-27,53;CL:0000051,3.10e-27,53;CL:0000226,2.01e-19,3;CL:0000842,2.01e-19,3;CL:0000624,1.17e-17,6;CL:0002087,1.02e-15,115;CL:0000738,1.03e-12,136;CL:0002031,4.23e-10,120;CL:0000898,1.18e-09,3;CL:0000037,1.42e-09,168;CL:0000988,6.75e-09,177;CL:0000810,9.44e-08,1;CL:0000895,9.44e-08,1;CL:0002436,9.44e-08,1;CL:0002427,9.44e-08,1;CL:0002428,9.44e-08,1;CL:0002429,9.44e-08,1;CL:0002433,9.44e-08,1;CL:0002431,9.44e-08,1;CL:0002432,9.44e-08,1;CL:0002032,9.56e-07,161;CL:0000837,9.56e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.27e-66;18!CL:0000051;6.76e-17;53!CL:0002427;1.68e-07;1!UBERON:0006298;1.68e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.34e-08!15;UBERON:0000179!1.34e-08!15;UBERON:0000463!1.34e-08!15;UBERON:0004177!1.07e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!1.34e-08!15;UBERON:0000179!1.34e-08!15;UBERON:0000463!1.34e-08!15;UBERON:0004177!1.07e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.68e-07;1!UBERON:0001736;1.68e-07;1!UBERON:0000178;7.92e-07;15!UBERON:0000179;7.92e-07;15!UBERON:0000463;7.92e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.91e-07,1;UBERON:0001736,2.04e-07,1;UBERON:0006298,2.04e-07,1;UBERON:0002370,3.38e-07,4;UBERON:0005058,3.38e-07,4;UBERON:0009113,3.38e-07,4;UBERON:0003295,3.38e-07,4;UBERON:0005562,3.38e-07,4;UBERON:0000178,7.68e-07,15;UBERON:0000179,7.68e-07,15;UBERON:0000463,7.68e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,4.91774425284583,0.786021525498329,2.2616164889946,0,3.91106719960308,1.89379122293893,0,0,0.883817722424512,1.99380505125259,1.08321545506006,0.128091319725675,0.260118695119756,0,0,0.289803085735052,8.15576097391332,6.95606153033254,7.31748666634838,0.453237370790265,1.91610246800961,1.37450978193052,0.759059076058509,1.59282707162048,3.25541726928209,1.90090408889675,3.01150238155546,2.68771883424279,1.24930726552346,1.65744076430812,0.821127996921047,1.81446068902259,1.33720097891754,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.2937654491571,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,1.2942852049117,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,1.66762242820452,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,1.77854608371035,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0.0802413666891683,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,1.55186785739645,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,4.91774425284583,0.786021525498329,2.2616164889946,0,3.91106719960308,1.89379122293893,0,0,0.883817722424512,1.99380505125259,1.08321545506006,0.128091319725675,0.260118695119756,0,0,0.289803085735052,8.15576097391332,6.95606153033254,7.31748666634838,0.453237370790265,1.91610246800961,1.37450978193052,0.759059076058509,1.59282707162048,3.25541726928209,1.90090408889675,3.01150238155546,2.68771883424279,1.24930726552346,1.65744076430812,0.821127996921047,1.81446068902259,1.33720097891754,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.2937654491571,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,1.2942852049117,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,1.66762242820452,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,1.77854608371035,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0.0802413666891683,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,1.55186785739645,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p3@ANAPC16 | |short_description=p3@ANAPC16 | ||
}} | }} |
Latest revision as of 05:16, 19 September 2015
Short description: | p3@ANAPC16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ANAPC16_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -306bp_to_NM_001242546, NM_001242547, NM_001242548, NM_173473, NR_038391, NR_038392_5end |
EntrezGene: | ANAPC16 |
HGNC: | 26976 |
UniProt: | C5H3H2Q96DE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.91e-07 | 1 |
submandibular gland | 2.04e-07 | 1 |
submandibular gland primordium | 2.04e-07 | 1 |
thymus | 3.38e-07 | 4 |
hemolymphoid system gland | 3.38e-07 | 4 |
thymic region | 3.38e-07 | 4 |
pharyngeal gland | 3.38e-07 | 4 |
thymus primordium | 3.38e-07 | 4 |
blood | 7.68e-07 | 15 |
haemolymphatic fluid | 7.68e-07 | 15 |
organism substance | 7.68e-07 | 15 |