FFCP PHASE1:Hg19::chr12:54679672..54679702,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:54679672..54679702,+ to FFCP PHASE1:Hg19::chr12:54679672..54679702,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3178 | |EntrezGene=3178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5031 | |HGNC=5031 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000551665_5end | |||
|cluster_id=chr12:54679672..54679702,+ | |||
|description=CAGE_peak_2_at_HNRNPA1_5end | |||
|id=chr12:54679672..54679702,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.16e-08!53;CL:0000051!1.16e-08!53;CL:0000838!3.15e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.76e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.16e-12,53;CL:0000051,1.16e-12,53;CL:0000838,7.37e-12,52;CL:0002087,4.75e-07,115;CL:0000084,8.67e-07,25;CL:0000827,8.67e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;3.76e-08;53 | |||
|ontology_enrichment_disease=DOID:162!2.30e-20!235;DOID:14566!1.17e-19!239;DOID:0050687!3.93e-15!143;DOID:305!3.50e-10!106;DOID:0050686!8.54e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.94e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.78e-10,235;DOID:14566,2.96e-09,239;DOID:0060058,1.60e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@HNRNPA1 | |||
}} | }} |
Latest revision as of 05:38, 19 September 2015
Short description: | p2@HNRNPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNRNPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000551665_5end |
EntrezGene: | HNRNPA1 |
HGNC: | 5031 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.16e-12 | 53 |
common lymphoid progenitor | 1.16e-12 | 53 |
lymphoid lineage restricted progenitor cell | 7.37e-12 | 52 |
nongranular leukocyte | 4.75e-07 | 115 |
T cell | 8.67e-07 | 25 |
pro-T cell | 8.67e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.78e-10 | 235 |
disease of cellular proliferation | 2.96e-09 | 239 |
lymphoma | 1.60e-07 | 10 |