FFCP PHASE1:Hg19::chr6:51952328..51952343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5314 | |EntrezGene=5314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9016 | |HGNC=9016 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000340994_5end | |association_with_transcript=64bp_to_ENST00000340994_5end | ||
|cluster_id=chr6:51952328..51952343,- | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_3_at_PKHD1_5end | |description=CAGE_peak_3_at_PKHD1_5end | ||
|id=chr6:51952328..51952343,- | |id=chr6:51952328..51952343,- | ||
|ontology_enrichment_celltype=CL:1000507!1.16e-08!12;CL:1000494!1.16e-08!12;CL:0000313!3.80e-08!1;CL:0002563!1.81e-07!4 | |ontology_enrichment_celltype=CL:1000507!1.16e-08!12;CL:1000494!1.16e-08!12;CL:0000313!3.80e-08!1;CL:0002563!1.81e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000313;5.72e-18;1!CL:0000159;1.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,6.23e-18,1;CL:0000159,1.22e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.33e-17;1!UBERON:0007297;9.87e-10;2!UBERON:0003918;1.02e-07;10!UBERON:0007687;1.02e-07;10 | |||
|ontology_enrichment_disease=DOID:4468!4.18e-14!2;DOID:2152!3.80e-08!1 | |ontology_enrichment_disease=DOID:4468!4.18e-14!2;DOID:2152!3.80e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;5.72e-18;1!DOID:4468;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,6.23e-18,1;DOID:4468,1.44e-09,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.76e-23,3;UBERON:0004054,5.76e-23,3;UBERON:0001301,4.44e-18,1;UBERON:0004911,6.23e-18,1;UBERON:0001000,1.22e-17,1;UBERON:0005352,1.22e-17,1;UBERON:0005904,1.71e-17,4;UBERON:0004909,1.22e-09,2;UBERON:0003135,5.98e-07,11 | |||
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|short_description=p3@PKHD1 | |short_description=p3@PKHD1 | ||
}} | }} |
Latest revision as of 05:43, 19 September 2015
Short description: | p3@PKHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PKHD1_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 64bp_to_ENST00000340994_5end |
EntrezGene: | PKHD1 |
HGNC: | 9016 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 6.23e-18 | 1 |
seromucus secreting cell | 1.22e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.76e-23 | 3 |
internal male genitalia | 5.76e-23 | 3 |
epididymis | 4.44e-18 | 1 |
epithelium of female gonad | 6.23e-18 | 1 |
vas deferens | 1.22e-17 | 1 |
spermatic cord | 1.22e-17 | 1 |
duct of male reproductive system | 1.71e-17 | 4 |
epithelium of gonad | 1.22e-09 | 2 |
male reproductive organ | 5.98e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.23e-18 | 1 |
clear cell adenocarcinoma | 1.44e-09 | 2 |