FFCP PHASE1:Hg19::chr19:49547457..49547458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93659 | |EntrezGene=93659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16452 | |HGNC=16452 | ||
|TSSclassifier=strong | |||
|UniProt=P01233 | |UniProt=P01233 | ||
|association_with_transcript=355bp_to_NM_033043,uc002ply.2_5end | |association_with_transcript=355bp_to_NM_033043,uc002ply.2_5end | ||
|cluster_id=chr19:49547457..49547458,+ | |||
|coexpression_cluster_id=C155 | |coexpression_cluster_id=C155 | ||
|description=CAGE_peak_2_at_CGB5_5end | |description=CAGE_peak_2_at_CGB5_5end | ||
|id=chr19:49547457..49547458,+ | |id=chr19:49547457..49547458,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!1.55e-98!4;UBERON:0010133!1.55e-98!4;UBERON:0001894!4.76e-57!7;UBERON:0006222!4.76e-57!7;UBERON:0000007!2.74e-50!2;UBERON:0001905!4.52e-50!2;UBERON:0002757!4.52e-50!2;UBERON:0010134!4.52e-50!2;UBERON:0002784!4.52e-50!2;UBERON:0005408!4.52e-50!2;UBERON:0001899!4.52e-50!2;UBERON:0002368!1.42e-12!35;UBERON:0002780!1.07e-10!41;UBERON:0001890!1.07e-10!41;UBERON:0006240!1.07e-10!41;UBERON:0003080!1.77e-10!42;UBERON:0000949!4.55e-10!45;UBERON:0001049!4.33e-08!57;UBERON:0005068!4.33e-08!57;UBERON:0006241!4.33e-08!57;UBERON:0007135!4.33e-08!57;UBERON:0002530!5.66e-08!59;UBERON:0002616!7.34e-08!59;UBERON:0003056!1.20e-07!61;UBERON:0000955!7.93e-07!69;UBERON:0006238!7.93e-07!69 | |ontology_enrichment_uberon=UBERON:0003296!1.55e-98!4;UBERON:0010133!1.55e-98!4;UBERON:0001894!4.76e-57!7;UBERON:0006222!4.76e-57!7;UBERON:0000007!2.74e-50!2;UBERON:0001905!4.52e-50!2;UBERON:0002757!4.52e-50!2;UBERON:0010134!4.52e-50!2;UBERON:0002784!4.52e-50!2;UBERON:0005408!4.52e-50!2;UBERON:0001899!4.52e-50!2;UBERON:0002368!1.42e-12!35;UBERON:0002780!1.07e-10!41;UBERON:0001890!1.07e-10!41;UBERON:0006240!1.07e-10!41;UBERON:0003080!1.77e-10!42;UBERON:0000949!4.55e-10!45;UBERON:0001049!4.33e-08!57;UBERON:0005068!4.33e-08!57;UBERON:0006241!4.33e-08!57;UBERON:0007135!4.33e-08!57;UBERON:0002530!5.66e-08!59;UBERON:0002616!7.34e-08!59;UBERON:0003056!1.20e-07!61;UBERON:0000955!7.93e-07!69;UBERON:0006238!7.93e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.55e-98;4!UBERON:0010133;1.55e-98;4!UBERON:0001894;4.76e-57;7!UBERON:0000007;2.74e-50;2!UBERON:0001905;4.52e-50;2!UBERON:0002757;4.52e-50;2!UBERON:0010134;4.52e-50;2!UBERON:0005408;4.52e-50;2!UBERON:0001899;4.52e-50;2!UBERON:0002784;7.14e-26;4!UBERON:0002368;1.71e-11;33!UBERON:0000073;3.67e-09;53!UBERON:0002616;3.67e-09;53!UBERON:0002780;3.68e-09;41!UBERON:0001890;3.68e-09;41!UBERON:0000949;3.43e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.55e-98,4;UBERON:0010133,1.55e-98,4;UBERON:0001894,4.76e-57,7;UBERON:0006222,4.76e-57,7;UBERON:0000007,2.74e-50,2;UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0002784,7.14e-26,4;UBERON:0002368,1.42e-12,35;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000949,4.55e-10,45;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0002530,5.66e-08,59;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p2@CGB5 | |short_description=p2@CGB5 | ||
}} | }} |
Latest revision as of 06:03, 19 September 2015
Short description: | p2@CGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CGB5_5end |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | 355bp_to_NM_033043, uc002ply.2_5end |
EntrezGene: | CGB5 |
HGNC: | 16452 |
UniProt: | P01233 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.55e-98 | 4 |
neuroendocrine gland | 1.55e-98 | 4 |
diencephalon | 4.76e-57 | 7 |
future diencephalon | 4.76e-57 | 7 |
pituitary gland | 2.74e-50 | 2 |
pineal body | 4.52e-50 | 2 |
regional part of epithalamus | 4.52e-50 | 2 |
secretory circumventricular organ | 4.52e-50 | 2 |
circumventricular organ | 4.52e-50 | 2 |
epithalamus | 4.52e-50 | 2 |
regional part of diencephalon | 7.14e-26 | 4 |
endocrine gland | 1.42e-12 | 35 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
endocrine system | 4.55e-10 | 45 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
gland | 5.66e-08 | 59 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |