FFCP PHASE1:Hg19::chr14:22961783..22961799,+: Difference between revisions
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|id=chr14:22961783..22961799,+
|short_description=p2@TRAJ47
|description=CAGE_peak_2_at_TRAJ47_5end
|association_with_transcript=-38bp_to_ENST00000390490_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12078 | |HGNC=12078 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_ENST00000390490_5end | |||
|cluster_id=chr14:22961783..22961799,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_2_at_TRAJ47_5end | |||
|id=chr14:22961783..22961799,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.01e-21!53;CL:0000051!7.01e-21!53;CL:0000838!1.18e-18!52;CL:0000791!1.87e-16!18;CL:0000789!1.87e-16!18;CL:0002420!1.87e-16!18;CL:0002419!1.87e-16!18;CL:0000790!1.87e-16!18;CL:0000084!1.70e-11!25;CL:0000827!1.70e-11!25;CL:0000625!4.65e-11!11;CL:0000893!4.75e-11!2;CL:0002489!4.75e-11!2;CL:0000809!4.75e-11!2;CL:0000808!4.75e-11!2;CL:0000894!4.75e-11!2;CL:0000806!4.75e-11!2;CL:0000807!4.75e-11!2;CL:0000805!4.75e-11!2;CL:0002425!4.75e-11!2;CL:0000945!8.34e-10!24;CL:0000826!8.34e-10!24;CL:0000738!1.25e-08!140;CL:0002087!2.12e-08!119;CL:0002031!6.26e-08!124;CL:0000898!9.99e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.66e-66;1!CL:0000786;4.66e-66;1!CL:0000945;4.20e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.66e-66,1;CL:0000786,4.66e-66,1;CL:0000980,4.66e-66,1;CL:0000785,7.05e-34,2;CL:0000955,7.05e-34,2;CL:0000818,7.05e-34,2;CL:0000954,7.05e-34,2;CL:0000816,7.05e-34,2;CL:0000817,4.09e-23,3;CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24 | |||
|ontology_enrichment_development_v019=CL:0000954;7.05e-34;2!UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.08e-27;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.08e-27,10 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.97e-19!4;UBERON:0005058!1.97e-19!4;UBERON:0009113!1.97e-19!4;UBERON:0003295!1.97e-19!4;UBERON:0005562!1.97e-19!4;UBERON:0004177!2.10e-17!7;UBERON:0003351!5.14e-13!6;UBERON:0001042!9.72e-12!10;UBERON:0009145!9.72e-12!10;UBERON:0006562!1.19e-10!11;UBERON:0000974!7.47e-08!10;UBERON:0003408!7.47e-08!10;UBERON:0009722!3.81e-07!11;UBERON:0007690!3.81e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p2@TRAJ47 | |||
}} | }} |
Latest revision as of 06:09, 19 September 2015
Short description: | p2@TRAJ47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAJ47_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -38bp_to_ENST00000390490_5end |
EntrezGene: | NA |
HGNC: | 12078 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.66e-66 | 1 |
plasma cell | 4.66e-66 | 1 |
plasmablast | 4.66e-66 | 1 |
mature B cell | 7.05e-34 | 2 |
pre-B-II cell | 7.05e-34 | 2 |
transitional stage B cell | 7.05e-34 | 2 |
small pre-B-II cell | 7.05e-34 | 2 |
immature B cell | 7.05e-34 | 2 |
precursor B cell | 4.09e-23 | 3 |
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.08e-27 | 10 |