FFCP PHASE1:Hg19::chrX:119694291..119694298,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:119694291..119694298,- to FFCP PHASE1:Hg19::chrX:119694291..119694298,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=A6NE76 | |UniProt=A6NE76 | ||
|association_with_transcript=-493bp_to_ENST00000371323_5end | |||
|cluster_id=chrX:119694291..119694298,- | |||
|coexpression_cluster_id=C964 | |||
|description=CAGE_peak_21_at_CUL4B_5end | |||
|id=chrX:119694291..119694298,- | |||
|ontology_enrichment_celltype=CL:0000055!6.32e-20!180;CL:0000057!1.01e-18!75;CL:0002620!4.49e-13!23;CL:0000222!7.42e-08!119;CL:0000680!6.01e-07!57;CL:0000056!6.01e-07!57;CL:0000355!6.01e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.36e-26;23!CL:0000057;1.37e-09;73!CL:0002602;6.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.23e-26,23;CL:0000057,8.31e-18,76;CL:0002602,7.26e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.60e-13;5!DOID:450;1.60e-13;5!DOID:66;1.60e-13;5!DOID:423;1.60e-13;5!DOID:0080000;1.60e-13;5!DOID:11722;1.60e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.57e-14,5;DOID:450,6.57e-14,5;DOID:66,6.57e-14,5;DOID:423,6.57e-14,5;DOID:0080000,6.57e-14,5;DOID:11722,6.57e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.75e-08!138;UBERON:0000914!8.65e-08!83;UBERON:0002329!8.65e-08!83;UBERON:0003077!8.65e-08!83;UBERON:0003059!8.65e-08!83;UBERON:0007282!8.65e-08!83;UBERON:0009618!8.65e-08!83;UBERON:0007285!8.65e-08!83;UBERON:0000475!6.36e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.44e-12;41!UBERON:0002199;2.47e-10;46!UBERON:0002416;2.47e-10;46!UBERON:0011135;2.03e-09;5!UBERON:0002216;2.03e-09;5!UBERON:0011134;2.03e-09;5!UBERON:0002209;2.03e-09;5!UBERON:0002213;2.03e-09;5!UBERON:0007844;2.03e-09;5!UBERON:0011138;2.03e-09;5!UBERON:0001130;2.03e-09;5!UBERON:0001066;2.03e-09;5!UBERON:0001468;2.03e-09;5!UBERON:0003102;3.37e-07;50!UBERON:0006444;6.52e-07;2!UBERON:0001995;6.52e-07;2!UBERON:0004715;6.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.51e-16,41;UBERON:0002199,3.14e-14,46;UBERON:0002416,3.14e-14,46;UBERON:0011135,1.91e-09,5;UBERON:0002216,1.91e-09,5;UBERON:0011134,1.91e-09,5;UBERON:0002209,1.91e-09,5;UBERON:0002213,1.91e-09,5;UBERON:0005856,1.91e-09,5;UBERON:0005866,1.91e-09,5;UBERON:0005863,1.91e-09,5;UBERON:0007844,1.91e-09,5;UBERON:0011138,1.91e-09,5;UBERON:0001130,1.91e-09,5;UBERON:0001066,1.91e-09,5;UBERON:0001468,1.91e-09,5;UBERON:0003102,4.38e-09,99;UBERON:0006444,7.26e-07,2;UBERON:0001995,7.26e-07,2;UBERON:0004715,7.26e-07,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0,4.57935505952172,2.31978163009541,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,2.43806866313962,0.670700859703636,0,3.61439152384566,3.50936537445123,1.88300474649071,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.892997282840798,0.673588117878509,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,2.38336525463794,0.286836620748814,0.709336764396714,0.560677600142307,0,0.49333509683432,0.933633106199299,0.269421344139376,2.28846664358842,0.151357427644931,1.15235184896,0,0.936480230490962,1.1409436430889,1.19558944441441,0.117434498643765,0,0.140450806702248,2.85815839756851,0.245668634623536,0.619954687054593,1.18800285728205,1.48360157567134,0,0,0.168336113954066,0.500474079487857,2.49357703935765,0.438977620880838,0,0.300476117813194,0.453728732640084,1.4351170855109,2.98980344345994,2.54318281391474,2.10063767259082,1.8549455262919,3.34932702059318,0.744467425326359,1.0126579934476,1.46155507741798,5.55354303337052,2.76149695926898,2.10139873864455,2.84007674013291,1.30977727695932,0.847802961552438,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,2.78620756819187,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0,1.40241773803446,0,0,0,0,1.77236972004421,0,0,1.54411029268673,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0.336393253036082,0,0.36669142910475,0.775630294546667,0,0.845302752556,1.32969058292435,2.08014873822732,0,0,0.266422179016099,1.00084595560703,0,0.823240336780769,1.95441710576241,1.06617584622764,0,5.42590878707255,1.74306691720059,0.799783929456456,0,0,0,0.718874566474748,0,0,0.723906533337896,1.02738161275192,1.07436577943937,0.112085143993527,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,11.2876172381609,0.500170521059677,1.35632511849868,3.11956292296211,1.24900292158013,0.946214490203608,1.87426263988341,0,0,1.03473071292505,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,1.07423381301644,0.280660094433074,0.384417447767103,1.02341449813341,0.160853921143607,0,0.154209693802656,0.177561725313127,0.492762936082855,0.519254429183621,0.581051892299796,0,0.200506470303285,0.0920809889358963,0.459257792658427,0.364182336013434,0,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0.770243085573222,0.767518373630648,0.827019434907183,0.107420244868274,0.580066775656914,0.255679882248303,0.0890320356467374,0,0,0,0,0.929691098594572,3.1481234683064,2.0911118104818,0,0.532306030317022,2.60979897622522,0.18532421910392,1.00187420719394,0,0,0.38126038784765,0,0,1.59101623962968,0,0.719489830333259,0.274537029736055,0,0.606547444719948,0,1.26377536871694,0,2.68084838594413,0,1.36499911407986,0.282810863907425,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0,0.430234056612155,0.196498082026242,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,1.24415835064723,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0.291604613383254,0.347249989866585,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0.569710279235006,0,0.0897576444097721,0,0,0.641183153813036,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.626531697032732,0,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.311064574191741,0,0.661983911750998,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0.19351266257817,0,0,0.0969890164884194,0,0,0.685209623233754,0,0.126621591911757,0,0,0,0.19980960958213,0,0.229073192331831,0,0.14405479798815,0.248505071130865,0,0.407712618220842,0.313808538937,1.83596791745379,0,0.600420288709789,0,0,0.859530882839914,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,1.08089965062721,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0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| ||
|short_description=p21@CUL4B | |||
}} | }} |
Latest revision as of 06:29, 19 September 2015
Short description: | p21@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CUL4B_5end |
Coexpression cluster: | C964_Nucleus_Anulus_meningioma_large_Olfactory_Chondrocyte_Mesothelial |
Association with transcript: | -493bp_to_ENST00000371323_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | A6NE76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.23e-26 | 23 |
fibroblast | 8.31e-18 | 76 |
annulus pulposus cell | 7.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.51e-16 | 41 |
integument | 3.14e-14 | 46 |
integumental system | 3.14e-14 | 46 |
intervertebral cartilage | 1.91e-09 | 5 |
symphysis | 1.91e-09 | 5 |
nonsynovial joint | 1.91e-09 | 5 |
fibrous joint | 1.91e-09 | 5 |
cartilaginous joint | 1.91e-09 | 5 |
developing mesenchymal condensation | 1.91e-09 | 5 |
pre-cartilage condensation | 1.91e-09 | 5 |
cartilaginous condensation | 1.91e-09 | 5 |
cartilage element | 1.91e-09 | 5 |
post-cranial axial skeletal system | 1.91e-09 | 5 |
vertebral column | 1.91e-09 | 5 |
intervertebral disk | 1.91e-09 | 5 |
intervertebral joint | 1.91e-09 | 5 |
surface structure | 4.38e-09 | 99 |
annulus fibrosus | 7.26e-07 | 2 |
fibrocartilage | 7.26e-07 | 2 |
annulus fibrosus disci intervertebralis | 7.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.57e-14 | 5 |
myotonic disease | 6.57e-14 | 5 |
muscle tissue disease | 6.57e-14 | 5 |
myopathy | 6.57e-14 | 5 |
muscular disease | 6.57e-14 | 5 |
myotonic dystrophy | 6.57e-14 | 5 |