FFCP PHASE1:Hg19::chr1:77461159..77461182,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81849 | |EntrezGene=81849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19342 | |HGNC=19342 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000488940_5end | |association_with_transcript=17bp_to_ENST00000488940_5end | ||
|cluster_id=chr1:77461159..77461182,+ | |||
|description=CAGE_peak_3_at_ST6GALNAC5_5end | |description=CAGE_peak_3_at_ST6GALNAC5_5end | ||
|id=chr1:77461159..77461182,+ | |id=chr1:77461159..77461182,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.76e-26!254;CL:0002076!1.92e-25!43;CL:0002159!3.24e-21!13;CL:0000223!1.72e-20!59;CL:0002368!1.00e-12!13;CL:0002251!3.05e-11!21;CL:0002077!3.80e-10!33;CL:0002621!4.45e-10!3;CL:0002166!4.72e-10!3;CL:0000362!3.69e-09!8;CL:0000240!3.22e-08!6;CL:0000311!3.22e-08!6;CL:0000079!3.22e-08!6;CL:0000237!3.22e-08!6;CL:0000036!3.22e-08!6;CL:0000357!3.22e-08!6;CL:0000114!3.22e-08!6;CL:0002202!8.55e-08!9;CL:0002632!8.55e-08!9;CL:0000220!3.27e-07!246;CL:0000063!4.16e-07!578;CL:0002321!4.40e-07!248;CL:0000076!5.88e-07!62;CL:0002327!5.91e-07!4;CL:0000244!7.25e-07!4;CL:0000731!7.25e-07!4;CL:0000317!8.34e-07!2;CL:1000448!8.34e-07!2;CL:0002308!8.34e-07!2;CL:0002140!8.34e-07!2 | |ontology_enrichment_celltype=CL:0000066!5.76e-26!254;CL:0002076!1.92e-25!43;CL:0002159!3.24e-21!13;CL:0000223!1.72e-20!59;CL:0002368!1.00e-12!13;CL:0002251!3.05e-11!21;CL:0002077!3.80e-10!33;CL:0002621!4.45e-10!3;CL:0002166!4.72e-10!3;CL:0000362!3.69e-09!8;CL:0000240!3.22e-08!6;CL:0000311!3.22e-08!6;CL:0000079!3.22e-08!6;CL:0000237!3.22e-08!6;CL:0000036!3.22e-08!6;CL:0000357!3.22e-08!6;CL:0000114!3.22e-08!6;CL:0002202!8.55e-08!9;CL:0002632!8.55e-08!9;CL:0000220!3.27e-07!246;CL:0000063!4.16e-07!578;CL:0002321!4.40e-07!248;CL:0000076!5.88e-07!62;CL:0002327!5.91e-07!4;CL:0000244!7.25e-07!4;CL:0000731!7.25e-07!4;CL:0000317!8.34e-07!2;CL:1000448!8.34e-07!2;CL:0002308!8.34e-07!2;CL:0002140!8.34e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.58e-36;14!CL:0002621;1.80e-17;3!CL:0002166;1.96e-17;3!CL:0002077;9.66e-15;34!CL:0000362;1.56e-14;9!CL:0000240;1.80e-14;6!CL:0000311;1.80e-14;6!CL:0000079;1.80e-14;6!CL:0000237;1.80e-14;6!CL:0002076;2.21e-11;42!CL:0000575;2.48e-11;2!CL:0000317;3.98e-11;2!CL:1000448;3.98e-11;2!CL:0002308;3.98e-11;2!CL:0002140;3.98e-11;2!CL:0000312;2.30e-10;5!CL:0002368;6.22e-10;13!CL:0002202;1.81e-09;9!CL:0002632;1.81e-09;9!CL:0000307;7.72e-08;3!CL:0000239;1.06e-07;3!CL:1000615;1.06e-07;3!CL:0002306;1.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.99e-36,14;CL:0000066,9.75e-21,253;CL:0002621,1.76e-17,3;CL:0002166,1.96e-17,3;CL:0002077,8.19e-17,34;CL:0000362,1.11e-14,9;CL:0000240,1.44e-14,6;CL:0000311,1.44e-14,6;CL:0000079,1.44e-14,6;CL:0000237,1.44e-14,6;CL:0000036,1.44e-14,6;CL:0000357,1.44e-14,6;CL:0000114,1.44e-14,6;CL:0002076,3.48e-13,42;CL:0000076,1.30e-11,63;CL:0000317,2.23e-11,2;CL:1000448,2.23e-11,2;CL:0002308,2.23e-11,2;CL:0002140,2.23e-11,2;CL:0000575,3.23e-11,2;CL:0000312,2.23e-10,5;CL:0002368,6.73e-10,13;CL:0002202,1.91e-09,9;CL:0002632,1.91e-09,9;CL:0000223,5.66e-09,58;CL:0000221,6.10e-08,72;CL:0000068,7.46e-08,3;CL:0000069,7.46e-08,3;CL:0000307,7.46e-08,3;CL:0000377,7.46e-08,3;CL:0000239,9.52e-08,3;CL:1000615,9.52e-08,3;CL:0002306,9.52e-08,3;CL:0002321,6.42e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;1.80e-14;6!CL:0000114;1.80e-14;6!CL:0000377;7.72e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!4.33e-07!14;DOID:305!6.17e-07!106 | |ontology_enrichment_disease=DOID:1749!4.33e-07!14;DOID:305!6.17e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.32e-09;14!DOID:3111;4.45e-07;1!DOID:3603;4.45e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.25e-09,14;DOID:3111,4.58e-07,1;DOID:3603,4.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!4.45e-10!3;UBERON:0004119!8.23e-10!169;UBERON:0000925!8.23e-10!169;UBERON:0006595!8.23e-10!169;UBERON:0005911!1.37e-08!82;UBERON:0001708!1.30e-07!4;UBERON:0001704!1.30e-07!4;UBERON:0001911!5.91e-07!4;UBERON:0005333!5.91e-07!4;UBERON:0008425!5.91e-07!4;UBERON:0005311!5.91e-07!4;UBERON:0002419!8.34e-07!2;UBERON:0007771!8.34e-07!2;UBERON:0003297!8.34e-07!2;UBERON:0001821!8.34e-07!2;UBERON:0003487!8.34e-07!2;UBERON:0001820!8.34e-07!2;UBERON:0005089!8.34e-07!2;UBERON:0005088!8.34e-07!2;UBERON:0005153!8.45e-07!37 | |ontology_enrichment_uberon=UBERON:0001949!4.45e-10!3;UBERON:0004119!8.23e-10!169;UBERON:0000925!8.23e-10!169;UBERON:0006595!8.23e-10!169;UBERON:0005911!1.37e-08!82;UBERON:0001708!1.30e-07!4;UBERON:0001704!1.30e-07!4;UBERON:0001911!5.91e-07!4;UBERON:0005333!5.91e-07!4;UBERON:0008425!5.91e-07!4;UBERON:0005311!5.91e-07!4;UBERON:0002419!8.34e-07!2;UBERON:0007771!8.34e-07!2;UBERON:0003297!8.34e-07!2;UBERON:0001821!8.34e-07!2;UBERON:0003487!8.34e-07!2;UBERON:0001820!8.34e-07!2;UBERON:0005089!8.34e-07!2;UBERON:0005088!8.34e-07!2;UBERON:0005153!8.45e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.80e-17;3!UBERON:0001708;3.33e-13;4!UBERON:0008895;3.33e-13;4!UBERON:0002419;3.98e-11;2!UBERON:0007771;3.98e-11;2!UBERON:0003297;3.98e-11;2!UBERON:0001821;3.98e-11;2!UBERON:0003487;3.98e-11;2!UBERON:0001820;3.98e-11;2!UBERON:0000486;4.72e-11;12!UBERON:0011159;1.17e-10;5!UBERON:0003729;3.50e-10;13!UBERON:0010371;7.75e-10;31!UBERON:0000344;3.00e-09;20!UBERON:0001003;1.26e-08;15!UBERON:0007376;1.26e-08;15!UBERON:0004807;1.90e-08;22!UBERON:0003929;9.57e-08;7!UBERON:0006853;1.06e-07;3!UBERON:0007685;1.06e-07;3!UBERON:0004134;1.06e-07;3!UBERON:0005911;5.99e-07;36!UBERON:0004913;6.42e-07;1!UBERON:0003703;6.42e-07;1!UBERON:0001174;6.42e-07;1!UBERON:0004914;6.42e-07;1!UBERON:0003350;7.97e-07;8!UBERON:0001828;7.97e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.76e-17,3;UBERON:0001708,3.33e-13,4;UBERON:0008895,3.33e-13,4;UBERON:0002419,2.23e-11,2;UBERON:0007771,2.23e-11,2;UBERON:0003297,2.23e-11,2;UBERON:0001821,2.23e-11,2;UBERON:0003487,2.23e-11,2;UBERON:0001820,2.23e-11,2;UBERON:0005089,2.23e-11,2;UBERON:0005088,2.23e-11,2;UBERON:0011159,1.18e-10,5;UBERON:0003102,2.25e-10,99;UBERON:0003729,2.96e-10,13;UBERON:0000344,2.66e-09,20;UBERON:0010188,5.95e-09,6;UBERON:0002539,5.95e-09,6;UBERON:0008816,5.95e-09,6;UBERON:0001003,1.03e-08,15;UBERON:0007376,1.03e-08,15;UBERON:0007383,1.03e-08,15;UBERON:0000033,8.19e-08,56;UBERON:0006853,9.52e-08,3;UBERON:0007685,9.52e-08,3;UBERON:0004134,9.52e-08,3;UBERON:0005911,4.49e-07,82;UBERON:0004913,6.43e-07,1;UBERON:0003703,6.43e-07,1;UBERON:0001174,6.43e-07,1;UBERON:0004914,6.43e-07,1;UBERON:0000153,6.91e-07,62;UBERON:0007811,6.91e-07,62;UBERON:0003350,7.90e-07,8;UBERON:0001828,7.90e-07,8 | |||
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| ||
|short_description=p3@ST6GALNAC5 | |short_description=p3@ST6GALNAC5 | ||
}} | }} |
Latest revision as of 06:36, 19 September 2015
Short description: | p3@ST6GALNAC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ST6GALNAC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000488940_5end |
EntrezGene: | ST6GALNAC5 |
HGNC: | 19342 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.76e-17 | 3 |
jaw skeleton | 3.33e-13 | 4 |
splanchnocranium | 3.33e-13 | 4 |
skin gland | 2.23e-11 | 2 |
epidermis gland | 2.23e-11 | 2 |
gland of integumental system | 2.23e-11 | 2 |
sebaceous gland | 2.23e-11 | 2 |
skin sebaceous gland | 2.23e-11 | 2 |
sweat gland | 2.23e-11 | 2 |
sweat gland placode | 2.23e-11 | 2 |
sebaceous gland placode | 2.23e-11 | 2 |
primary subdivision of cranial skeletal system | 1.18e-10 | 5 |
surface structure | 2.25e-10 | 99 |
mouth mucosa | 2.96e-10 | 13 |
mucosa | 2.66e-09 | 20 |
protuberance | 5.95e-09 | 6 |
pharyngeal arch | 5.95e-09 | 6 |
embryonic head | 5.95e-09 | 6 |
skin epidermis | 1.03e-08 | 15 |
outer epithelium | 1.03e-08 | 15 |
enveloping layer of ectoderm | 1.03e-08 | 15 |
head | 8.19e-08 | 56 |
renal cortex tubule | 9.52e-08 | 3 |
region of nephron tubule | 9.52e-08 | 3 |
proximal tubule | 9.52e-08 | 3 |
endo-epithelium | 4.49e-07 | 82 |
hepatopancreatic ampulla | 6.43e-07 | 1 |
extrahepatic bile duct | 6.43e-07 | 1 |
common bile duct | 6.43e-07 | 1 |
duodenal papilla | 6.43e-07 | 1 |
anterior region of body | 6.91e-07 | 62 |
craniocervical region | 6.91e-07 | 62 |
epithelium of mucosa | 7.90e-07 | 8 |
gingiva | 7.90e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.25e-09 | 14 |
cystadenocarcinoma | 4.58e-07 | 1 |
mucinous cystadenocarcinoma | 4.58e-07 | 1 |