FFCP PHASE1:Hg19::chr15:78556512..78556526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55466 | |EntrezGene=55466 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14885 | |HGNC=14885 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6V9 | |UniProt=F5H6V9 | ||
|association_with_transcript=-4bp_to_ENST00000419495_5end | |association_with_transcript=-4bp_to_ENST00000419495_5end | ||
|cluster_id=chr15:78556512..78556526,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_5_at_DNAJA4_5end | |description=CAGE_peak_5_at_DNAJA4_5end | ||
|id=chr15:78556512..78556526,+ | |id=chr15:78556512..78556526,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.26e-14;2!CL:0000558;4.26e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.27e-14,2;CL:0000765,4.27e-14,2;CL:0000050,4.27e-14,2;CL:0000038,4.27e-14,2;CL:0000558,4.27e-14,2;CL:0000547,4.27e-14,2;CL:0000549,4.27e-14,2;CL:0000550,4.27e-14,2;CL:0000552,4.27e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3111;3.40e-07;1!DOID:3603;3.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.40e-07,1;DOID:3603,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-11!115;UBERON:0000178!6.37e-10!15;UBERON:0000179!6.37e-10!15;UBERON:0000463!6.37e-10!15;UBERON:0005631!3.03e-07!14;UBERON:0000158!3.03e-07!14;UBERON:0004119!4.32e-07!169;UBERON:0000925!4.32e-07!169;UBERON:0006595!4.32e-07!169;UBERON:0000305!8.62e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.10e-11!115;UBERON:0000178!6.37e-10!15;UBERON:0000179!6.37e-10!15;UBERON:0000463!6.37e-10!15;UBERON:0005631!3.03e-07!14;UBERON:0000158!3.03e-07!14;UBERON:0004119!4.32e-07!169;UBERON:0000925!4.32e-07!169;UBERON:0006595!4.32e-07!169;UBERON:0000305!8.62e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.22e-32;15!UBERON:0000179;2.22e-32;15!UBERON:0000463;2.22e-32;15!UBERON:0002390;1.83e-16;32!UBERON:0003127;5.36e-13;2!UBERON:0002193;2.79e-08;42!UBERON:0007029;3.40e-07;1!UBERON:0000997;3.40e-07;1!UBERON:0005056;3.40e-07;1!UBERON:0004176;3.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.88e-32,15;UBERON:0000179,2.88e-32,15;UBERON:0000463,2.88e-32,15;UBERON:0003127,5.53e-13,2;UBERON:0007023,7.62e-08,114;UBERON:0000997,2.66e-07,1;UBERON:0005056,2.66e-07,1;UBERON:0007029,2.83e-07,1 | |||
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| ||
|short_description=p5@DNAJA4 | |short_description=p5@DNAJA4 | ||
}} | }} |
Latest revision as of 06:44, 19 September 2015
Short description: | p5@DNAJA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DNAJA4_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -4bp_to_ENST00000419495_5end |
EntrezGene: | DNAJA4 |
HGNC: | 14885 |
UniProt: | F5H6V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.27e-14 | 2 |
erythroblast | 4.27e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 4.27e-14 | 2 |
erythroid progenitor cell | 4.27e-14 | 2 |
reticulocyte | 4.27e-14 | 2 |
proerythroblast | 4.27e-14 | 2 |
basophilic erythroblast | 4.27e-14 | 2 |
polychromatophilic erythroblast | 4.27e-14 | 2 |
orthochromatic erythroblast | 4.27e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.88e-32 | 15 |
haemolymphatic fluid | 2.88e-32 | 15 |
organism substance | 2.88e-32 | 15 |
open tracheal system trachea | 5.53e-13 | 2 |
adult organism | 7.62e-08 | 114 |
mammalian vulva | 2.66e-07 | 1 |
external female genitalia | 2.66e-07 | 1 |
surface | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.40e-07 | 1 |
mucinous cystadenocarcinoma | 3.40e-07 | 1 |