FFCP PHASE1:Hg19::chr15:78558553..78558565,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55466 | |EntrezGene=55466 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14885 | |HGNC=14885 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDM9,Q69YX3,Q8N5Z4,Q8WW22 | |UniProt=E9PDM9,Q69YX3,Q8N5Z4,Q8WW22 | ||
|association_with_transcript=0bp_to_NM_001130183,uc002bdk.2_5end | |association_with_transcript=0bp_to_NM_001130183,uc002bdk.2_5end | ||
|cluster_id=chr15:78558553..78558565,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_11_at_DNAJA4_5end | |description=CAGE_peak_11_at_DNAJA4_5end | ||
|id=chr15:78558553..78558565,+ | |id=chr15:78558553..78558565,+ | ||
|ontology_enrichment_celltype=CL:0000149!3.59e-07!4;CL:0000147!4.05e-07!14;CL:0001014!6.70e-07!2;CL:0001016!6.70e-07!2 | |ontology_enrichment_celltype=CL:0000149!3.59e-07!4;CL:0000147!4.05e-07!14;CL:0001014!6.70e-07!2;CL:0001016!6.70e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002566;8.74e-15;1!CL:0000047;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,8.17e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.23e-30;4!UBERON:0007284;2.23e-30;4!UBERON:0004140;5.80e-15;1!UBERON:0010226;7.12e-15;1!UBERON:0000358;8.74e-15;1!UBERON:0008814;7.03e-08;2!UBERON:0010056;7.03e-08;2!UBERON:0003104;9.31e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.40e-07!2;DOID:1909!3.93e-07!2 | |ontology_enrichment_disease=DOID:114!1.40e-07!2;DOID:1909!3.93e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.06e-27;2!DOID:178;1.84e-14;1!DOID:326;1.84e-14;1!DOID:3978;1.84e-14;1!DOID:3394;1.84e-14;1!DOID:5844;1.84e-14;1!DOID:1287;2.26e-14;4!DOID:1909;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.20e-28,2;DOID:178,1.07e-14,1;DOID:326,1.07e-14,1;DOID:3978,1.07e-14,1;DOID:3394,1.07e-14,1;DOID:5844,1.07e-14,1;DOID:1287,1.72e-14,4;DOID:1909,5.74e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-19!115;UBERON:0003978!2.20e-10!3;UBERON:0009751!2.20e-10!3;UBERON:0000946!2.20e-10!3;UBERON:0002523!2.20e-10!3;UBERON:0005983!2.20e-10!3;UBERON:0002165!2.20e-10!3;UBERON:0002062!2.20e-10!3;UBERON:0007280!2.20e-10!3;UBERON:0004151!2.34e-10!3;UBERON:0001723!1.61e-09!3;UBERON:0001033!1.61e-09!3;UBERON:0010056!1.61e-09!3;UBERON:0007100!5.99e-08!27;UBERON:0002133!1.63e-07!2;UBERON:0002081!2.15e-07!2;UBERON:0003103!2.31e-07!69;UBERON:0003075!6.66e-07!86;UBERON:0007284!6.66e-07!86;UBERON:0003127!6.70e-07!2;UBERON:0000369!8.45e-07!4;UBERON:0002435!8.45e-07!4;UBERON:0000204!8.45e-07!4;UBERON:0010082!8.45e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-19!115;UBERON:0003978!2.20e-10!3;UBERON:0009751!2.20e-10!3;UBERON:0000946!2.20e-10!3;UBERON:0002523!2.20e-10!3;UBERON:0005983!2.20e-10!3;UBERON:0002165!2.20e-10!3;UBERON:0002062!2.20e-10!3;UBERON:0007280!2.20e-10!3;UBERON:0004151!2.34e-10!3;UBERON:0001723!1.61e-09!3;UBERON:0001033!1.61e-09!3;UBERON:0010056!1.61e-09!3;UBERON:0007100!5.99e-08!27;UBERON:0002133!1.63e-07!2;UBERON:0002081!2.15e-07!2;UBERON:0003103!2.31e-07!69;UBERON:0003075!6.66e-07!86;UBERON:0007284!6.66e-07!86;UBERON:0003127!6.70e-07!2;UBERON:0000369!8.45e-07!4;UBERON:0002435!8.45e-07!4;UBERON:0000204!8.45e-07!4;UBERON:0010082!8.45e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.13e-40;3!UBERON:0000946;3.13e-40;3!UBERON:0007100;2.77e-33;25!UBERON:0002133;1.30e-27;2!UBERON:0004151;4.83e-19;3!UBERON:0000948;3.45e-15;22!UBERON:0002134;5.80e-15;1!UBERON:0005208;5.80e-15;1!UBERON:0004145;5.80e-15;1!UBERON:0005946;5.80e-15;1!UBERON:0005965;5.80e-15;1!UBERON:0002078;5.80e-15;1!UBERON:0002084;7.12e-15;1!UBERON:0002082;7.12e-15;1!UBERON:0002135;1.84e-14;1!UBERON:0002146;1.84e-14;1!UBERON:0005623;1.84e-14;1!UBERON:0010313;1.46e-12;10!UBERON:0002081;3.95e-08;2!UBERON:0003103;8.53e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.93e-40,3;UBERON:0009751,2.93e-40,3;UBERON:0000946,2.93e-40,3;UBERON:0002523,2.93e-40,3;UBERON:0005983,2.93e-40,3;UBERON:0002165,2.93e-40,3;UBERON:0002062,2.93e-40,3;UBERON:0007280,2.93e-40,3;UBERON:0007100,6.78e-31,27;UBERON:0002133,1.22e-27,2;UBERON:0004151,5.06e-19,3;UBERON:0004797,1.10e-17,7;UBERON:0003103,6.08e-15,68;UBERON:0002134,6.22e-15,1;UBERON:0005208,6.22e-15,1;UBERON:0005946,6.22e-15,1;UBERON:0005965,6.22e-15,1;UBERON:0002078,6.22e-15,1;UBERON:0002084,7.13e-15,1;UBERON:0002082,7.13e-15,1;UBERON:0010226,7.13e-15,1;UBERON:0002135,1.61e-14,1;UBERON:0002146,1.84e-14,1;UBERON:0005623,1.84e-14,1;UBERON:0000948,6.19e-14,24;UBERON:0005498,6.19e-14,24;UBERON:0004140,6.19e-14,24;UBERON:0009881,6.19e-14,24;UBERON:0004141,6.19e-14,24;UBERON:0003084,6.19e-14,24;UBERON:0007005,6.19e-14,24;UBERON:0004139,6.19e-14,24;UBERON:0004291,6.19e-14,24;UBERON:0010313,1.44e-12,10;UBERON:0002342,1.44e-12,10;UBERON:0005062,1.44e-12,10;UBERON:0007023,1.84e-08,114;UBERON:0002081,4.09e-08,2;UBERON:0010227,4.09e-08,2;UBERON:0001009,7.13e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,2.73040945456327,0,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,1.39641200636127,1.3749625440701,4.30723814746088,1.99679000498991,6.00916467391199,1.78537165953498,4.83721001904429,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81978941049977,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,1.30630048738177,0.684466602170562,0.134704106029175,0.286888821570705,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,2.73040945456327,0,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,1.39641200636127,1.3749625440701,4.30723814746088,1.99679000498991,6.00916467391199,1.78537165953498,4.83721001904429,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81978941049977,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,1.30630048738177,0.684466602170562,0.134704106029175,0.286888821570705,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0.402547587182052,0 | ||
|short_description=p11@DNAJA4 | |short_description=p11@DNAJA4 | ||
}} | }} |
Latest revision as of 06:49, 19 September 2015
Short description: | p11@DNAJA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_DNAJA4_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_NM_001130183, uc002bdk.2_5end |
EntrezGene: | DNAJA4 |
HGNC: | 14885 |
UniProt: | E9PDM9Q69YX3Q8N5Z4Q8WW22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 8.17e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.20e-28 | 2 |
vascular disease | 1.07e-14 | 1 |
ischemia | 1.07e-14 | 1 |
extrinsic cardiomyopathy | 1.07e-14 | 1 |
myocardial ischemia | 1.07e-14 | 1 |
myocardial infarction | 1.07e-14 | 1 |
cardiovascular system disease | 1.72e-14 | 4 |
melanoma | 5.74e-08 | 2 |