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FFCP PHASE1:Hg19::chr17:27050447..27050450,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=26809
|EntrezGene=26809
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=10180
|HGNC=10180
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENST00000459584,NR_000014,uc002hcm.1_5end
|association_with_transcript=0bp_to_ENST00000459584,NR_000014,uc002hcm.1_5end
|cluster_id=chr17:27050447..27050450,+
|coexpression_cluster_id=C229
|coexpression_cluster_id=C229
|description=CAGE_peak_1_at_SNORD42A_5end
|description=CAGE_peak_1_at_SNORD42A_5end

Latest revision as of 07:14, 19 September 2015

Short description:p1@SNORD42A
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_SNORD42A_5end
Coexpression cluster:C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart
Association with transcript: 0bp_to_ENST00000459584, NR_000014, uc002hcm.1_5end
EntrezGene:SNORD42A
HGNC: 10180
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data