FFCP PHASE2:Hg19::chr2:197791441..197791525,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:80055 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:25712 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=80055 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25712 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q75T13,A6NI33,E7ESR7 | ||
|association_with_transcript=0bp_to_ENST00000354764,ENST00000374738,ENST00000409475,ENST00000422382,ENST00000470179,NM_024989,uc002utw.2,uc002utx.2,uc002uty.1_5end | |association_with_transcript=0bp_to_ENST00000354764,ENST00000374738,ENST00000409475,ENST00000422382,ENST00000470179,NM_024989,uc002utw.2,uc002utx.2,uc002uty.1_5end | ||
|cluster_id=chr2:197791441..197791525,- | |cluster_id=chr2:197791441..197791525,- |
Latest revision as of 07:34, 19 September 2015
Short description: | p1@PGAP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PGAP1_5end |
Coexpression cluster: | C4167_parietal_temporal_occipital_duodenum_putamen_pituitary_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000354764, ENST00000374738, ENST00000409475, ENST00000422382, ENST00000470179, NM_024989, uc002utw.2, uc002utx.2, uc002uty.1_5end |
EntrezGene: | PGAP1 |
HGNC: | 25712 |
UniProt: | Q75T13A6NI33E7ESR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PGAP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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nervous system | 3.22e-35 | 89 |
central nervous system | 1.43e-33 | 81 |
neural tube | 4.87e-29 | 56 |
neural rod | 4.87e-29 | 56 |
future spinal cord | 4.87e-29 | 56 |
neural keel | 4.87e-29 | 56 |
brain | 8.60e-28 | 68 |
future brain | 8.60e-28 | 68 |
regional part of nervous system | 2.31e-27 | 53 |
regional part of brain | 2.31e-27 | 53 |
Showing 1 to 10 of 41 entries