FFCP PHASE1:Hg19::chr3:61547212..61547223,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5793 | |EntrezGene=5793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9671 | |HGNC=9671 | ||
|TSSclassifier=strong | |||
|UniProt=P23470,Q49A02 | |UniProt=P23470,Q49A02 | ||
|association_with_transcript=-19bp_to_ENST00000495879,NM_002841,uc003dla.3,uc003dlb.2,uc003dlc.2_5end | |association_with_transcript=-19bp_to_ENST00000495879,NM_002841,uc003dla.3,uc003dlb.2,uc003dlc.2_5end | ||
|cluster_id=chr3:61547212..61547223,+ | |||
|description=CAGE_peak_4_at_PTPRG_5end | |description=CAGE_peak_4_at_PTPRG_5end | ||
|id=chr3:61547212..61547223,+ | |id=chr3:61547212..61547223,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.00e-20!82;UBERON:0000924!2.82e-20!173;UBERON:0006601!2.82e-20!173;UBERON:0005743!2.83e-20!86;UBERON:0000073!2.23e-19!94;UBERON:0001016!2.23e-19!94;UBERON:0004121!2.68e-19!169;UBERON:0002346!3.89e-19!90;UBERON:0000475!2.08e-18!365;UBERON:0003075!3.70e-18!86;UBERON:0007284!3.70e-18!86;UBERON:0001049!6.76e-18!57;UBERON:0005068!6.76e-18!57;UBERON:0006241!6.76e-18!57;UBERON:0007135!6.76e-18!57;UBERON:0002616!1.10e-17!59;UBERON:0000955!7.02e-17!69;UBERON:0006238!7.02e-17!69;UBERON:0000033!3.07e-16!123;UBERON:0003080!3.11e-15!42;UBERON:0002780!4.22e-15!41;UBERON:0001890!4.22e-15!41;UBERON:0006240!4.22e-15!41;UBERON:0002020!6.30e-15!34;UBERON:0003528!6.30e-15!34;UBERON:0000153!8.10e-15!129;UBERON:0007811!8.10e-15!129;UBERON:0003056!8.50e-15!61;UBERON:0001893!1.07e-14!34;UBERON:0001869!1.68e-14!32;UBERON:0007023!1.89e-14!115;UBERON:0002791!2.40e-14!33;UBERON:0002619!2.23e-13!22;UBERON:0000481!5.73e-13!347;UBERON:0001950!4.22e-12!20;UBERON:0000956!6.16e-12!25;UBERON:0000203!6.16e-12!25;UBERON:0000119!6.51e-12!312;UBERON:0000483!7.33e-12!309;UBERON:0000468!2.21e-11!659;UBERON:0000922!4.38e-09!612;UBERON:0000062!5.51e-08!511;UBERON:0000477!1.44e-07!286;UBERON:0002050!2.28e-07!605;UBERON:0005423!2.28e-07!605;UBERON:0000064!2.61e-07!219;UBERON:0000923!3.54e-07!604;UBERON:0005291!3.54e-07!604;UBERON:0006598!3.54e-07!604;UBERON:0002532!3.54e-07!604;UBERON:0000480!4.01e-07!626;UBERON:0000467!7.48e-07!625 | |ontology_enrichment_uberon=UBERON:0001017!2.00e-20!82;UBERON:0000924!2.82e-20!173;UBERON:0006601!2.82e-20!173;UBERON:0005743!2.83e-20!86;UBERON:0000073!2.23e-19!94;UBERON:0001016!2.23e-19!94;UBERON:0004121!2.68e-19!169;UBERON:0002346!3.89e-19!90;UBERON:0000475!2.08e-18!365;UBERON:0003075!3.70e-18!86;UBERON:0007284!3.70e-18!86;UBERON:0001049!6.76e-18!57;UBERON:0005068!6.76e-18!57;UBERON:0006241!6.76e-18!57;UBERON:0007135!6.76e-18!57;UBERON:0002616!1.10e-17!59;UBERON:0000955!7.02e-17!69;UBERON:0006238!7.02e-17!69;UBERON:0000033!3.07e-16!123;UBERON:0003080!3.11e-15!42;UBERON:0002780!4.22e-15!41;UBERON:0001890!4.22e-15!41;UBERON:0006240!4.22e-15!41;UBERON:0002020!6.30e-15!34;UBERON:0003528!6.30e-15!34;UBERON:0000153!8.10e-15!129;UBERON:0007811!8.10e-15!129;UBERON:0003056!8.50e-15!61;UBERON:0001893!1.07e-14!34;UBERON:0001869!1.68e-14!32;UBERON:0007023!1.89e-14!115;UBERON:0002791!2.40e-14!33;UBERON:0002619!2.23e-13!22;UBERON:0000481!5.73e-13!347;UBERON:0001950!4.22e-12!20;UBERON:0000956!6.16e-12!25;UBERON:0000203!6.16e-12!25;UBERON:0000119!6.51e-12!312;UBERON:0000483!7.33e-12!309;UBERON:0000468!2.21e-11!659;UBERON:0000922!4.38e-09!612;UBERON:0000062!5.51e-08!511;UBERON:0000477!1.44e-07!286;UBERON:0002050!2.28e-07!605;UBERON:0005423!2.28e-07!605;UBERON:0000064!2.61e-07!219;UBERON:0000923!3.54e-07!604;UBERON:0005291!3.54e-07!604;UBERON:0006598!3.54e-07!604;UBERON:0002532!3.54e-07!604;UBERON:0000480!4.01e-07!626;UBERON:0000467!7.48e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.24e-15;22!UBERON:0001950;4.54e-14;20!UBERON:0001869;1.48e-13;32!UBERON:0003528;1.75e-13;34!UBERON:0002020;1.75e-13;34!UBERON:0002791;3.10e-13;32!UBERON:0001893;7.74e-13;34!UBERON:0000956;1.59e-12;25!UBERON:0000203;1.59e-12;25!UBERON:0000922;3.31e-12;49!UBERON:0002780;4.42e-12;41!UBERON:0001890;4.42e-12;41!UBERON:0000073;1.28e-09;53!UBERON:0002616;1.28e-09;53!UBERON:0001017;1.48e-09;75!UBERON:0000955;7.79e-09;68!UBERON:0001016;9.87e-08;83 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.24e-15;22!UBERON:0001950;4.54e-14;20!UBERON:0001869;1.48e-13;32!UBERON:0003528;1.75e-13;34!UBERON:0002020;1.75e-13;34!UBERON:0002791;3.10e-13;32!UBERON:0001893;7.74e-13;34!UBERON:0000956;1.59e-12;25!UBERON:0000203;1.59e-12;25!UBERON:0000922;3.31e-12;49!UBERON:0002780;4.42e-12;41!UBERON:0001890;4.42e-12;41!UBERON:0000073;1.28e-09;53!UBERON:0002616;1.28e-09;53!UBERON:0001017;1.48e-09;75!UBERON:0000955;7.79e-09;68!UBERON:0001016;9.87e-08;83 | ||
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| ||
|short_description=p4@PTPRG | |short_description=p4@PTPRG | ||
}} | }} |
Latest revision as of 07:36, 19 September 2015
Short description: | p4@PTPRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRG_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000495879, NM_002841, uc003dla.3, uc003dlb.2, uc003dlc.2_5end |
EntrezGene: | PTPRG |
HGNC: | 9671 |
UniProt: | P23470Q49A02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data