FFCP PHASE1:Hg19::chr15:79237334..79237406,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:79237334..79237406,-
|short_description=p1@CTSH
|description=CAGE_peak_1_at_CTSH_5end
|association_with_transcript=0bp_to_ENST00000525807,ENST00000528436,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1512 | |EntrezGene=1512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2535 | |HGNC=2535 | ||
|TSSclassifier=strong | |||
|UniProt=E9PN60 | |UniProt=E9PN60 | ||
|association_with_transcript=0bp_to_ENST00000525807,ENST00000528436,ENST00000530010,ENST00000533777,ENST00000534038,ENST00000534268_5end | |||
|cluster_id=chr15:79237334..79237406,- | |||
|description=CAGE_peak_1_at_CTSH_5end | |||
|id=chr15:79237334..79237406,- | |||
|ontology_enrichment_celltype=CL:0002087!5.17e-25!119;CL:0000738!7.82e-24!140;CL:0002009!1.16e-23!65;CL:0002057!1.22e-22!42;CL:0002194!2.05e-22!63;CL:0000576!2.05e-22!63;CL:0000040!2.05e-22!63;CL:0000559!2.05e-22!63;CL:0002031!1.86e-20!124;CL:0000037!3.06e-20!172;CL:0000566!3.06e-20!172;CL:0002032!5.33e-20!165;CL:0000837!5.33e-20!165;CL:0000988!1.61e-19!182;CL:0000557!7.30e-19!71;CL:0000860!2.53e-18!45;CL:0000766!8.98e-18!76;CL:0000839!2.01e-16!70;CL:0000763!8.91e-16!112;CL:0000049!8.91e-16!112;CL:0000945!9.56e-09!24;CL:0000826!9.56e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.78e-17;39!CL:0000234;1.78e-17;39!CL:0000860;1.28e-16;33!CL:0002057;1.28e-16;33!CL:0000576;1.18e-15;48!CL:0000766;7.09e-10;69!CL:0000945;7.49e-09;24!CL:0002087;3.09e-08;104!CL:0000738;1.39e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.47e-29,61;CL:0002087,8.32e-29,115;CL:0002194,1.36e-27,59;CL:0000576,1.36e-27,59;CL:0000040,1.36e-27,59;CL:0000559,1.36e-27,59;CL:0000738,3.80e-27,136;CL:0000473,7.29e-27,48;CL:0000234,7.29e-27,48;CL:0002031,1.42e-23,120;CL:0000037,4.67e-23,168;CL:0000557,5.21e-23,67;CL:0002032,8.40e-23,161;CL:0000837,8.40e-23,161;CL:0000860,1.09e-22,42;CL:0002057,1.09e-22,42;CL:0000988,1.97e-22,177;CL:0000766,1.37e-21,72;CL:0000839,3.48e-20,66;CL:0000763,1.04e-18,108;CL:0000049,1.04e-18,108;CL:0000945,7.69e-09,24;CL:0000826,7.69e-09,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.60e-19!115;UBERON:0002193!1.96e-18!112;UBERON:0002390!1.17e-17!102;UBERON:0003061!1.17e-17!102;UBERON:0002405!9.14e-15!115;UBERON:0002371!3.95e-13!80;UBERON:0001474!7.19e-12!86;UBERON:0004765!6.45e-07!101;UBERON:0001434!6.45e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-21,108;UBERON:0002390,6.78e-21,98;UBERON:0003061,6.78e-21,98;UBERON:0007023,9.65e-19,114;UBERON:0002405,3.78e-18,93;UBERON:0002371,3.05e-16,76;UBERON:0001474,1.16e-14,82;UBERON:0004765,4.70e-10,90;UBERON:0001434,2.43e-07,100 | |||
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| ||
|short_description=p1@CTSH | |||
}} | }} |
Latest revision as of 07:40, 19 September 2015
Short description: | p1@CTSH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTSH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525807, ENST00000528436, ENST00000530010, ENST00000533777, ENST00000534038, ENST00000534268_5end |
EntrezGene: | CTSH |
HGNC: | 2535 |
UniProt: | E9PN60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.47e-29 | 61 |
nongranular leukocyte | 8.32e-29 | 115 |
monopoietic cell | 1.36e-27 | 59 |
monocyte | 1.36e-27 | 59 |
monoblast | 1.36e-27 | 59 |
promonocyte | 1.36e-27 | 59 |
leukocyte | 3.80e-27 | 136 |
defensive cell | 7.29e-27 | 48 |
phagocyte | 7.29e-27 | 48 |
hematopoietic lineage restricted progenitor cell | 1.42e-23 | 120 |
hematopoietic stem cell | 4.67e-23 | 168 |
granulocyte monocyte progenitor cell | 5.21e-23 | 67 |
hematopoietic oligopotent progenitor cell | 8.40e-23 | 161 |
hematopoietic multipotent progenitor cell | 8.40e-23 | 161 |
classical monocyte | 1.09e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.09e-22 | 42 |
hematopoietic cell | 1.97e-22 | 177 |
myeloid leukocyte | 1.37e-21 | 72 |
myeloid lineage restricted progenitor cell | 3.48e-20 | 66 |
myeloid cell | 1.04e-18 | 108 |
common myeloid progenitor | 1.04e-18 | 108 |
lymphocyte of B lineage | 7.69e-09 | 24 |
pro-B cell | 7.69e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.40e-21 | 108 |
hematopoietic system | 6.78e-21 | 98 |
blood island | 6.78e-21 | 98 |
adult organism | 9.65e-19 | 114 |
immune system | 3.78e-18 | 93 |
bone marrow | 3.05e-16 | 76 |
bone element | 1.16e-14 | 82 |
skeletal element | 4.70e-10 | 90 |
skeletal system | 2.43e-07 | 100 |