FFCP PHASE1:Hg19::chrX:123094600..123094609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10735 | |EntrezGene=10735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |HGNC=11355 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000469481_5end | |association_with_transcript=55bp_to_ENST00000469481_5end | ||
|cluster_id=chrX:123094600..123094609,+ | |||
|description=CAGE_peak_16_at_STAG2_5end | |description=CAGE_peak_16_at_STAG2_5end | ||
|id=chrX:123094600..123094609,+ | |id=chrX:123094600..123094609,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.63e-27!172;CL:0000566!1.63e-27!172;CL:0000988!8.65e-27!182;CL:0002032!3.05e-26!165;CL:0000837!3.05e-26!165;CL:0000738!2.18e-25!140;CL:0002031!6.27e-20!124;CL:0002087!1.05e-18!119;CL:0000763!9.72e-18!112;CL:0000049!9.72e-18!112;CL:0000766!1.29e-14!76;CL:0002009!6.95e-12!65;CL:0000557!1.78e-11!71;CL:0000860!4.26e-11!45;CL:0002057!8.47e-11!42;CL:0000839!1.43e-10!70;CL:0002194!1.64e-10!63;CL:0000576!1.64e-10!63;CL:0000040!1.64e-10!63;CL:0000559!1.64e-10!63;CL:0000838!1.75e-08!52;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000094!4.54e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.63e-27!172;CL:0000566!1.63e-27!172;CL:0000988!8.65e-27!182;CL:0002032!3.05e-26!165;CL:0000837!3.05e-26!165;CL:0000738!2.18e-25!140;CL:0002031!6.27e-20!124;CL:0002087!1.05e-18!119;CL:0000763!9.72e-18!112;CL:0000049!9.72e-18!112;CL:0000766!1.29e-14!76;CL:0002009!6.95e-12!65;CL:0000557!1.78e-11!71;CL:0000860!4.26e-11!45;CL:0002057!8.47e-11!42;CL:0000839!1.43e-10!70;CL:0002194!1.64e-10!63;CL:0000576!1.64e-10!63;CL:0000040!1.64e-10!63;CL:0000559!1.64e-10!63;CL:0000838!1.75e-08!52;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000094!4.54e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000771;4.09e-19;2!CL:0001014;1.05e-18;2!CL:0001016;1.05e-18;2!CL:0000453;2.15e-16;5!CL:0000094;9.44e-11;8!CL:0000990;2.38e-09;8!CL:0000081;6.00e-08;11!CL:0000451;9.79e-08;10!CL:0000840;8.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,3.75e-19,2;CL:0001014,7.68e-19,2;CL:0001016,7.68e-19,2;CL:0000453,1.38e-16,5;CL:0000763,2.12e-11,108;CL:0000049,2.12e-11,108;CL:0000094,9.61e-11,8;CL:0000990,1.87e-09,8;CL:0000738,1.25e-08,136;CL:0000766,1.78e-08,72;CL:0002032,3.41e-08,161;CL:0000837,3.41e-08,161;CL:0000081,6.08e-08,11;CL:0000451,8.04e-08,10;CL:0000037,9.39e-08,168;CL:0000988,3.07e-07,177;CL:0000557,3.24e-07,67;CL:0000840,7.26e-07,5;CL:0001029,7.26e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.26e-10;1!DOID:4549;2.26e-10;1!DOID:5861;2.26e-10;1!DOID:6496;2.26e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.98e-10,1;DOID:4549,1.98e-10,1;DOID:5861,1.98e-10,1;DOID:6496,1.98e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.40e-13!102;UBERON:0003061!1.40e-13!102;UBERON:0002193!1.69e-11!112;UBERON:0002371!3.33e-10!80;UBERON:0001474!1.87e-09!86;UBERON:0002405!1.29e-07!115;UBERON:0004765!3.56e-07!101;UBERON:0001434!3.56e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.80e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0.309868802321207,0,0.293600439334847,0,0.802177789880567,0.434021741431704,0.223915474239924,0,0.515151135268373,0.436194716338694,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0.709446689665756,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0,0,0.870627715885752,1.13477044938228,1.24564449799115,0.251248665256743,0,0,1.81619850790011,0.736555271975129,1.26584954976354,0.211255286311942,0,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,1.17903228824749,0.616804496998528,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0.328875809207352,0,0.289803085735052,0.889719378972363,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.752875595388864,0.127986611154418,0,0.473554504088034,0.821127996921047,0.604820229674197,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,2.46331618947972,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.5867062865676,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.591092280605782,0.431255149719035,0.77005821767849,0.508189248444927,0,0,0,0,2.24702107184155,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0.711418433484141,0.478278818186467,0,0.5745161103971,0.846694330895531,0,0,0.228234679033192,0.156679895773023,0,0.50787533340481,0.642352300414798,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0.278406173895242,0,1.08182271390393,0,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.369254416383208,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,1.52581736317083,0.663475559587348,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0.158936578980379,0.421996129056054,0.163232808159148,0,0,0,0.176915129006678,0,0,0.370691816839509,0.417687798021821,0.067401132980677,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0.150323419414493,0.311064574191741,0.664653872707185,0,0,0,0.569219092059585,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0,0.193978032976839,2.91245218081951,0,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,1.16495949527454,0,0,0,0.0984274815147488,0.254019996197353,0,0.136203406111576,0,0.137539436597234,0.415440338029185,3.82455615637551,1.5476039091159,0.121499113316049,0,0,0.0524545881349981,1.79520572082991,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0,0,0,0.395223263795889,0.487170393523584,0,0,0.2506898940227,0,0,0.471162288750703,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0,0,0,0.303298235083296,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0.276516872303462,1.55888247071511,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0.33946505990805,0.637724760305049,0.123935764259002,0,0,0.157723490002507,0,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0.460935950223117,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0,0,0.23248285073625,1.043149633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| ||
|short_description=p16@STAG2 | |short_description=p16@STAG2 | ||
}} | }} |
Latest revision as of 07:49, 19 September 2015
Short description: | p16@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000469481_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 3.75e-19 | 2 |
CD1a-positive Langerhans cell | 7.68e-19 | 2 |
immature CD1a-positive Langerhans cell | 7.68e-19 | 2 |
Langerhans cell | 1.38e-16 | 5 |
myeloid cell | 2.12e-11 | 108 |
common myeloid progenitor | 2.12e-11 | 108 |
granulocyte | 9.61e-11 | 8 |
conventional dendritic cell | 1.87e-09 | 8 |
leukocyte | 1.25e-08 | 136 |
myeloid leukocyte | 1.78e-08 | 72 |
hematopoietic oligopotent progenitor cell | 3.41e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.41e-08 | 161 |
blood cell | 6.08e-08 | 11 |
dendritic cell | 8.04e-08 | 10 |
hematopoietic stem cell | 9.39e-08 | 168 |
hematopoietic cell | 3.07e-07 | 177 |
granulocyte monocyte progenitor cell | 3.24e-07 | 67 |
immature conventional dendritic cell | 7.26e-07 | 5 |
common dendritic progenitor | 7.26e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.80e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.98e-10 | 1 |
extraosseous chondrosarcoma | 1.98e-10 | 1 |
myxoid chondrosarcoma | 1.98e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.98e-10 | 1 |