FFCP PHASE1:Hg19::chr18:3247779..3247859,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16701 | |||
|TSSclassifier=strong | |||
|UniProt=P19105,Q53X45 | |||
|association_with_transcript=251bp_to_ENST00000217652,NM_006471,uc002klr.2_5end | |||
|cluster_id=chr18:3247779..3247859,+ | |||
|description=CAGE_peak_1_at_MYL12A_5end | |||
|id=chr18:3247779..3247859,+ | |||
|ontology_enrichment_celltype=CL:0002371!3.10e-25!591;CL:0000003!1.83e-22!722;CL:0000144!1.16e-21!625;CL:0000048!2.46e-21!430;CL:0000723!6.64e-21!436;CL:0000034!6.18e-19!444;CL:0000548!9.45e-19!679;CL:0000004!9.45e-19!679;CL:0000255!9.45e-19!679;CL:0000012!3.22e-18!682;CL:0000359!2.66e-14!32;CL:0000222!2.84e-14!119;CL:0000192!6.70e-13!42;CL:0000514!6.70e-13!42;CL:0000680!2.15e-12!57;CL:0000056!2.15e-12!57;CL:0000355!2.15e-12!57;CL:0000187!1.06e-11!54;CL:0000063!2.76e-11!578;CL:0000134!2.77e-10!358;CL:0000055!5.23e-10!180;CL:0002320!7.33e-10!365;CL:0000183!8.31e-10!59;CL:0000393!1.35e-08!60;CL:0000211!1.35e-08!60;CL:0002139!2.29e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.87e-13;32!CL:0000192;3.32e-09;43!CL:0002139;2.26e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.98e-22,427;CL:0000723,8.30e-22,433;CL:0000034,8.69e-20,441;CL:0000222,2.59e-14,121;CL:0000359,2.66e-14,32;CL:0000192,1.17e-12,43;CL:0000514,1.17e-12,43;CL:0000680,3.17e-12,58;CL:0000056,3.17e-12,58;CL:0000355,3.17e-12,58;CL:0000187,1.56e-11,55;CL:0000134,6.16e-11,354;CL:0002320,1.71e-10,361;CL:0000393,1.71e-08,61;CL:0000211,1.71e-08,61;CL:0002139,2.29e-07,24;CL:0000219,4.07e-07,386;CL:0000057,7.27e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;3.32e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!9.18e-22!110;UBERON:0001009!4.43e-21!113;UBERON:0002049!1.07e-17!79;UBERON:0007798!1.07e-17!79;UBERON:0004872!1.94e-16!84;UBERON:0000055!2.89e-16!69;UBERON:0001981!4.98e-15!60;UBERON:0007500!4.98e-15!60;UBERON:0004537!4.98e-15!60;UBERON:0006965!4.98e-15!60;UBERON:0000914!8.82e-15!83;UBERON:0002329!8.82e-15!83;UBERON:0003077!8.82e-15!83;UBERON:0003059!8.82e-15!83;UBERON:0007282!8.82e-15!83;UBERON:0009618!8.82e-15!83;UBERON:0007285!8.82e-15!83;UBERON:0003081!1.82e-14!216;UBERON:0001637!4.11e-14!42;UBERON:0003509!4.11e-14!42;UBERON:0004572!4.11e-14!42;UBERON:0004290!5.22e-14!70;UBERON:0000486!2.13e-13!82;UBERON:0001134!7.20e-13!61;UBERON:0002036!7.20e-13!61;UBERON:0003082!7.20e-13!61;UBERON:0002385!6.16e-12!63;UBERON:0001015!6.16e-12!63;UBERON:0000383!6.16e-12!63;UBERON:0002204!4.48e-11!167;UBERON:0004573!7.77e-11!33;UBERON:0004571!7.77e-11!33;UBERON:0003914!1.58e-10!118;UBERON:0000490!2.04e-10!138;UBERON:0000926!3.87e-10!448;UBERON:0004120!3.87e-10!448;UBERON:0006603!3.87e-10!448;UBERON:0002384!3.01e-09!375;UBERON:0005256!8.07e-08!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.09e-10;42!UBERON:0003509;6.09e-10;42!UBERON:0004572;6.09e-10;42!UBERON:0004573;7.41e-10;33!UBERON:0004571;7.41e-10;33!UBERON:0007500;5.49e-09;56!UBERON:0001981;5.49e-09;56!UBERON:0004537;5.49e-09;56!UBERON:0002049;8.58e-09;75!UBERON:0007798;8.58e-09;75!UBERON:0000055;1.55e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.20e-21,109;UBERON:0001009,1.51e-20,112;UBERON:0000926,7.02e-19,315;UBERON:0004120,7.02e-19,315;UBERON:0006603,7.02e-19,315;UBERON:0002049,3.70e-17,78;UBERON:0007798,3.70e-17,78;UBERON:0004872,6.39e-16,83;UBERON:0000055,1.00e-15,68;UBERON:0003081,2.56e-15,203;UBERON:0007500,1.74e-14,59;UBERON:0001981,1.74e-14,59;UBERON:0004537,1.74e-14,59;UBERON:0006965,1.74e-14,59;UBERON:0001637,4.11e-14,42;UBERON:0003509,4.11e-14,42;UBERON:0004572,4.11e-14,42;UBERON:0002329,7.45e-14,71;UBERON:0003059,7.45e-14,71;UBERON:0007282,7.45e-14,71;UBERON:0004290,7.45e-14,71;UBERON:0009618,7.45e-14,71;UBERON:0000486,2.83e-13,83;UBERON:0007524,4.29e-13,73;UBERON:0003077,4.75e-13,72;UBERON:0007285,4.75e-13,72;UBERON:0001134,1.05e-12,62;UBERON:0002036,1.05e-12,62;UBERON:0003082,1.05e-12,62;UBERON:0007503,2.81e-12,78;UBERON:0002204,7.78e-12,167;UBERON:0002385,8.58e-12,64;UBERON:0001015,8.58e-12,64;UBERON:0000383,8.58e-12,64;UBERON:0000490,1.49e-11,148;UBERON:0004573,7.77e-11,33;UBERON:0004571,7.77e-11,33;UBERON:0003914,1.37e-10,117;UBERON:0002384,7.51e-10,371;UBERON:0005256,7.15e-07,122 | |||
|phase1_expression=1141.84861371545,892.585084101509,1042.21686388561,1613.18156945246,833.582441106892,1150.61451328839,785.229622321763,488.951182032367,280.774550314826,474.757965320915,248.417215798184,251.644460693958,361.888294129438,392.710637942228,406.624580018153,979.577738380237,891.385206947462,927.493814791964,855.834129078549,363.576484500755,258.672876497713,165.50409294043,402.447797906266,333.699848327692,482.962534521206,320.707063924151,332.096884325031,329.955595266943,440.961354347621,466.352718688113,342.608080898476,490.970933871747,343.073541488427,407.099165193633,113.257047248401,82.1738163777296,221.961932137145,358.435029320125,280.160593115788,293.181686337116,362.966983742917,421.709553156711,429.378471246189,431.541972697748,401.304252197516,352.959809028273,447.658325080349,398.010515605127,445.048054976264,552.081700866207,455.70989691527,576.780158698259,476.438530778007,402.782442556308,415.759313844629,495.830322355221,487.137477853255,661.361214721884,678.587989386291,570.932739168371,524.256443155214,445.299255252067,362.026538583262,306.455595633007,601.893960915683,487.383908009689,455.283064015765,431.142709580571,417.186334736161,532.981424906356,529.724564804198,591.822161032016,600.329148975358,829.599509346995,649.931344993138,860.648739811883,606.574608191074,561.511402334392,553.21746941135,854.468205736263,738.776539117421,934.692474813632,728.624452069876,646.081977123102,673.358505174711,675.940672545347,587.38091298183,649.470257148566,657.078603548153,698.367348319887,182.717363084133,151.507194857702,165.906581006349,224.691258584344,274.649195860953,315.270749475767,256.902959768666,247.203769769225,285.580482110318,817.040402974244,558.956687276608,622.110416735439,703.32448955256,854.183972938626,697.921394807889,790.654469768944,689.195833281965,520.306940725692,510.092761129842,790.946321143682,835.682453784405,1076.90826659146,599.374288301048,601.699322373765,655.437734257205,1012.07904897466,853.432039251479,861.817633270436,901.509162665489,873.824931490997,1160.23071477214,1191.86686373826,983.857828054167,997.783620559846,894.504002114796,909.934979605157,983.711340311414,355.029474818754,270.916918328693,258.801209738562,619.269440437463,446.016071702918,1206.12754587002,737.6973100169,889.373453468068,654.271726146041,570.220024035638,294.414096533095,642.742221898497,769.179279797634,763.723461601731,159.20506626747,205.826837885286,221.358312342304,771.449154717182,734.827491402908,806.921862388993,722.149610396575,1421.9793481994,1068.31177382383,722.898875592706,882.600694578884,477.318189710442,466.379052087308,998.828157615786,683.393216179128,704.313037229052,905.750740888498,984.761015116814,1084.8295059703,1043.32793131269,1018.76462166281,873.498103964899,726.134583683091,728.317611145702,644.297539569636,420.768044301442,376.57279073623,728.254027962945,761.311058973639,579.283914307948,487.587544513434,856.994383767799,226.332813061975,1065.01089248307,680.765630708781,778.3011648201,436.565336779695,571.016095339355,937.452947437937,735.500580577667,696.342489181643,541.195990560194,640.549245691367,609.059051000747,396.707817857365,461.516915508479,148.091144918959,616.828311816713,633.794193735883,558.938065263736,440.027066418187,429.934540241757,473.178767779875,419.332667757551,483.721541573742,223.183687339653,582.121400068206,540.278240473647,398.650676528856,292.477583719209,462.082632803912,312.170707080551,476.827342748279,823.960994393333,1174.46123350184,521.326064405891,1104.94289616176,595.214811215644,840.561882389881,1091.87315477406,584.277364076331,962.098412970066,856.654795651717,1115.77055370788,392.573748793185,1081.74563129963,732.057945307932,861.034751900068,725.467503002828,714.279300143428,1317.63594062108,805.073692290195,638.340597998369,729.050380339301,579.345282685788,203.574115530295,239.746350893567,238.546164711121,234.999611719845,237.181599823091,335.049215631612,1071.67929645924,927.553432874141,772.174210360366,1073.1542816819,898.018075196964,342.734799715428,361.108406147294,367.300809542427,350.073069452618,378.892353276694,372.989413242644,355.550159618354,374.979219854536,432.071057250796,519.661440055752,164.082875350032,440.795766135929,368.99186557771,214.216008848894,318.436018203551,262.901508473225,169.96329327464,420.743448255991,983.25512082085,450.854172458634,611.46553772145,572.814084801473,477.663788572854,135.210446703785,214.226565767593,837.121783746585,509.630060270438,950.423379838976,1177.59711438708,900.043836448931,923.874163251209,342.948708714325,424.092164074867,477.907208815638,789.764394844927,551.272980928893,1480.05723865121,1427.51212543391,1338.07336777364,392.71412205199,428.39442536958,547.087083168756,1064.64525709313,632.627998385029,422.120043241012,342.284889365283,424.04833387921,543.541975140967,302.152844616598,399.71149498626,364.384310028362,540.152819170558,454.419046517847,417.592418073275,577.362953294262,581.134771754762,730.669341634125,658.5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| |||
|short_description=p1@MYL12A | |||
}} |
Latest revision as of 07:53, 19 September 2015
Short description: | p1@MYL12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYL12A_5end |
Coexpression cluster: | NA |
Association with transcript: | 251bp_to_ENST00000217652, NM_006471, uc002klr.2_5end |
EntrezGene: | MYL12A |
HGNC: | 16701 |
UniProt: | P19105Q53X45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.98e-22 | 427 |
somatic stem cell | 8.30e-22 | 433 |
stem cell | 8.69e-20 | 441 |
mesodermal cell | 2.59e-14 | 121 |
vascular associated smooth muscle cell | 2.66e-14 | 32 |
smooth muscle cell | 1.17e-12 | 43 |
smooth muscle myoblast | 1.17e-12 | 43 |
muscle precursor cell | 3.17e-12 | 58 |
myoblast | 3.17e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.17e-12 | 58 |
muscle cell | 1.56e-11 | 55 |
mesenchymal cell | 6.16e-11 | 354 |
connective tissue cell | 1.71e-10 | 361 |
electrically responsive cell | 1.71e-08 | 61 |
electrically active cell | 1.71e-08 | 61 |
endothelial cell of vascular tree | 2.29e-07 | 24 |
motile cell | 4.07e-07 | 386 |
fibroblast | 7.27e-07 | 76 |