FFCP PHASE1:Hg19::chr19:50016535..50016546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2217 | |EntrezGene=2217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3621 | |HGNC=3621 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-78bp_to_ENST00000415900_5end | |association_with_transcript=-78bp_to_ENST00000415900_5end | ||
|cluster_id=chr19:50016535..50016546,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_5_at_FCGRT_5end | |description=CAGE_peak_5_at_FCGRT_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.79e-15;12!CL:0002619;2.02e-08;3 | |ontology_enrichment_celltype_v019=CL:0000182;6.79e-15;12!CL:0002619;2.02e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.11e-15,12;CL:0002619,2.08e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.84e-13;11!UBERON:0009497;1.01e-10;13!UBERON:0003104;2.08e-08;31 | |ontology_enrichment_development_v019=UBERON:0004161;5.84e-13;11!UBERON:0009497;1.01e-10;13!UBERON:0003104;2.08e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.82e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!6.82e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.95e-13;19!UBERON:0006925;1.95e-13;19!UBERON:0005409;3.26e-13;22!UBERON:0000160;2.15e-12;17!UBERON:0002423;1.56e-11;25!UBERON:0000059;7.38e-08;11!UBERON:0004921;1.75e-07;33!UBERON:0002368;3.08e-07;33!UBERON:0002365;3.83e-07;31!UBERON:0002330;3.83e-07;31!UBERON:0001155;6.99e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.95e-13;19!UBERON:0006925;1.95e-13;19!UBERON:0005409;3.26e-13;22!UBERON:0000160;2.15e-12;17!UBERON:0002423;1.56e-11;25!UBERON:0000059;7.38e-08;11!UBERON:0004921;1.75e-07;33!UBERON:0002368;3.08e-07;33!UBERON:0002365;3.83e-07;31!UBERON:0002330;3.83e-07;31!UBERON:0001155;6.99e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.24e-13,19;UBERON:0006925,2.24e-13,19;UBERON:0008836,2.24e-13,19;UBERON:0009856,9.45e-13,26;UBERON:0009854,1.11e-12,23;UBERON:0000160,2.13e-12,17;UBERON:0009497,1.75e-11,25;UBERON:0000015,1.75e-11,25;UBERON:0002423,1.75e-11,25;UBERON:0006235,1.75e-11,25;UBERON:0004161,1.75e-11,25;UBERON:0005409,2.02e-11,25;UBERON:0007499,2.58e-11,25;UBERON:0008835,3.43e-11,22;UBERON:0003894,3.43e-11,22;UBERON:0003929,1.86e-08,54;UBERON:0005172,2.17e-08,54;UBERON:0005173,2.17e-08,54;UBERON:0002417,4.53e-08,60;UBERON:0000916,4.53e-08,60;UBERON:0000059,7.27e-08,11;UBERON:0002368,3.22e-07,35;UBERON:0002365,3.29e-07,31;UBERON:0002330,3.29e-07,31;UBERON:0004921,5.64e-07,118;UBERON:0001155,6.93e-07,9 | |||
|phase1_expression=0,0,0.704772020479856,1.0007329835313,0.893922188854576,1.74467704820074,7.59899634504932,0,1.82829939739887,0.491467873003018,0,0.873765488520689,0.263766978228454,0.247532705920093,1.65698687863958,0,0,0,0,0.369363174230364,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0,0.217010870715852,10.5240272892764,6.15397965436061,8.49999373192816,0.145398238779565,0,0.242584061187816,1.85943229524548,1.23350366406548,0,0.575384784644301,1.2808035326455,0.47296445977717,0.344745680736619,0,0,1.31769637679823,0.272906150057846,0.898893937780338,0.918251677112708,0,0,0.659702600373432,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,1.5644487552606,1.08594422352558,1.21079900526674,0.368277635987565,0.316462387440884,0.422510572623884,1.06302149982522,1.04829322754188,0.561643155732475,0.750884464207532,0.32145117339416,0.285012743741249,0.99458338599545,1.0959849225878,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0.790152254325231,0.590129310341499,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0,0.14828656316206,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0.189069634328136,0.443458794925128,0.614843499851882,2.94702919869853,0,0,0,0.174129737299267,0,0.238490624305342,0.571994910780128,0.74291500265913,0,0.860234595106124,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0.516833518338658,1.06729878806013,0,0.805658634218294,0,0.976248230192678,0.367663080345869,0,0.267899184852239,0.22452937262617,0,3.06633274931766,0.949265659568129,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.662648841607426,0.348581828608555,0.310983165046111,0.504641701751257,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,5.90524363699719,0,0,0,19.0132552232746,6.87979051674338,7.68026878685825,0,2.58275720940538,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0.234817388471643,0.433099343283221,0,0.951270761172991,0,0,2.70838706696137,0,0.297262324577456,0.93733833986777,0,0,0,0,0,0,0,0,0.864719720501769,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.775630294546667,3.57656445851882,0.845302752556,0,0,0,0,0,0.285955987316295,1.62786481617433,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,3.64871341923571,3.01354254859276,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.542530047399471,0.623912584592421,0.178428988797162,0,0.234282829985426,0,2.27407504055985,0,0,0,0.173767228936166,1.56640925970192,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,1.66435439510497,0.30239029332968,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0.116210378459959,3.14234568938218,0,0,0.34444334449382,0,0.131124414959424,0,0.0770153371044148,0,0,0,2.27466768141793,0.170093705276516,0,0,0.812839312631559,1.00337954770971,0,0,0.447749509444357,0,0,0,0.656029291399411,0.650756789328606,9.89193711818134,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.929691098594572,0,0,0.616067160352178,0,0,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0.141405431953713,2.26016233240486,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,9.13194867534758,0,0,0.443430153536676,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.213425530045242,0.159426272728822,0,0.191505370132367,0,0.973865820823666,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0.18714054040822,1.75809815126273,0.121360521749513,0,0.284136146806413,0,1.78178808499583,0,0,0,0,0,0.211125408127993,0.597743964753209,3.03912307084262,4.53478946137697,0,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.371072392647405,0,0,0.0874599999961957,2.89999830173917,0.1137934482855,1.5255219017566,0,0,4.66567381413207,0.173624994933292,1.77148277162768,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0.10893846351899,0.41827123283581,0.538651809526579,0,0.23056390438806,0.179515288819544,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,2.68570835724488,0,9.95261931078505,20.875985222788,23.2191455074778,0,0,0,0.337005664903385,1.60515529459758,0.234264445725339,0,0,0,0,18.1486074072996,0,0.821425535170343,0.450970258243478,0.414752765588989,0,0,0,0,1.4230477301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| ||
|short_description=p5@FCGRT | |short_description=p5@FCGRT | ||
}} | }} |
Latest revision as of 07:58, 19 September 2015
Short description: | p5@FCGRT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FCGRT_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -78bp_to_ENST00000415900_5end |
EntrezGene: | FCGRT |
HGNC: | 3621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.11e-15 | 12 |
adult endothelial progenitor cell | 2.08e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.24e-13 | 19 |
digestive gland | 2.24e-13 | 19 |
liver bud | 2.24e-13 | 19 |
sac | 9.45e-13 | 26 |
digestive tract diverticulum | 1.11e-12 | 23 |
intestine | 2.13e-12 | 17 |
epithelium of foregut-midgut junction | 1.75e-11 | 25 |
anatomical boundary | 1.75e-11 | 25 |
hepatobiliary system | 1.75e-11 | 25 |
foregut-midgut junction | 1.75e-11 | 25 |
septum transversum | 1.75e-11 | 25 |
gastrointestinal system | 2.02e-11 | 25 |
epithelial sac | 2.58e-11 | 25 |
hepatic diverticulum | 3.43e-11 | 22 |
liver primordium | 3.43e-11 | 22 |
gut epithelium | 1.86e-08 | 54 |
abdomen element | 2.17e-08 | 54 |
abdominal segment element | 2.17e-08 | 54 |
abdominal segment of trunk | 4.53e-08 | 60 |
abdomen | 4.53e-08 | 60 |
large intestine | 7.27e-08 | 11 |
endocrine gland | 3.22e-07 | 35 |
exocrine gland | 3.29e-07 | 31 |
exocrine system | 3.29e-07 | 31 |
subdivision of digestive tract | 5.64e-07 | 118 |
colon | 6.93e-07 | 9 |