FFCP PHASE1:Hg19::chr12:56114226..56114241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5959 | |EntrezGene=5959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9940 | |HGNC=9940 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000548082_5end | |association_with_transcript=29bp_to_ENST00000548082_5end | ||
|cluster_id=chr12:56114226..56114241,+ | |||
|description=CAGE_peak_3_at_RDH5_5end | |description=CAGE_peak_3_at_RDH5_5end | ||
|id=chr12:56114226..56114241,+ | |id=chr12:56114226..56114241,+ | ||
|ontology_enrichment_celltype=CL:0000136!2.44e-08!15;CL:0002540!5.38e-07!6 | |ontology_enrichment_celltype=CL:0000136!2.44e-08!15;CL:0002540!5.38e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.79e-14;13!CL:0002521;2.41e-09;3!CL:0002561;8.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.66e-12,15;CL:0002521,2.20e-09,3;CL:0002561,6.75e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.81e-08!83;UBERON:0002329!3.81e-08!83;UBERON:0003077!3.81e-08!83;UBERON:0003059!3.81e-08!83;UBERON:0007282!3.81e-08!83;UBERON:0009618!3.81e-08!83;UBERON:0007285!3.81e-08!83;UBERON:0000481!4.05e-08!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.41e-09;3!UBERON:0002072;2.53e-09;5!UBERON:0000160;4.15e-09;17!UBERON:0001013;7.53e-07;14!UBERON:0005409;8.07e-07;22!UBERON:0005933;8.84e-07;2!UBERON:0005942;8.84e-07;2!UBERON:0005932;8.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.20e-09,3;UBERON:0000160,3.21e-09,17;UBERON:0002072,3.32e-09,5;UBERON:0005933,6.75e-07,2;UBERON:0005942,6.75e-07,2;UBERON:0005932,6.75e-07,2;UBERON:0001013,8.55e-07,14 | |||
|phase1_expression=0,3.21150785836475,0.704772020479856,0,0.446961094427288,0,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0,1.23766352960047,0.331397375727916,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,1.05927344650575,0,0,0.560677600142307,0,0,0,0,0,0,0,0,1.87296046098192,0,1.94283284717341,0,0,0,0.61246251376468,0,0.826606249406124,0,1.23633464639278,0,0.718618141816238,0.673344455816265,0,0.277064115484183,1.31693286264251,0.612975591598039,0.600952235626387,0,0,0.213557388818567,0.211931901159562,0,0,0,0.558350568994769,0.168776332241266,0,0.252433774244115,0.460249493211497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,1.39310378409594,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,3.54473944008842,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,1.30303176000821,1.02738161275192,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,1.24782516918484,1.07057393278297,0,1.17141414992713,0.902838299183157,0,0,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,1.06537035187876,1.06765302817952,0,0.116210378459959,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,1.62689197332152,8.3463219434655,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.580066775656914,0.170453254832202,0,0,0,0,0,0,0,0.6970372701606,0.308033580176089,1.06461206063404,0,0,0.143124886741991,0,0.316379424718726,0,1.27948895655667,0.42793898803392,1.27281299170375,0,0,0,0,0.202182481573316,3.17020642346017,0,0,0,0,0,0,2.26016233240486,0,0,0.438450885253763,1.15755106853338,0,0,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0.354761064070598,2.74439925886963,0,0.379473173765715,0,0,0,0,8.5670858706869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.10513566212459,0,0.306806047506464,0,1.55519793830904,0,0.179021174675609,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,1.99052386215701,5.66128412821371,1.83309043480088,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0.242780379534093,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.387956065953678,0,4.74559555639118,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.458320848023367,0,0.399358000997982,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0.236349546921671,0.329663433524666,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,2.7800931711549,0,0,0,0,0,0,2.17199840701485,0.864221491201268,1.30634944043764,0,0,0.170388021785422,0,5.8620893471233,1.32506888912221,0.258565912723101,0,0.684347351537318,0,0,0,0,0.496166021811951,0,0,0,12.5124094774979,22.0607106739976,17.1553522987538,9.83617892129413,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.597019211547496,0,1.10961172300523,0.947015026375446,1.0062716070103,6.22867855117575,0.228840068396924,1.20984739010591,0.15543720058278,0.443565449968902,0.159296767163702,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0,0.464033759878494,0.796191777397232,1.20008329398946,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.235479278551542,0.157115589916002,0.280272163313789,0,2.59113109462346,0,30.163101642549,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0.294450700845729,1.82876887473404,0,0.307988420568741,0,1.45713297917742,0,0,0,0,0,0,9.72394392160103,7.21246549663059,0,0.735444965261716,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,1.11598505450025,0.924351257262837,4.32626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,1.33064142618405,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|phase1_expression=0,3.21150785836475,0.704772020479856,0,0.446961094427288,0,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0,1.23766352960047,0.331397375727916,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,1.05927344650575,0,0,0.560677600142307,0,0,0,0,0,0,0,0,1.87296046098192,0,1.94283284717341,0,0,0,0.61246251376468,0,0.826606249406124,0,1.23633464639278,0,0.718618141816238,0.673344455816265,0,0.277064115484183,1.31693286264251,0.612975591598039,0.600952235626387,0,0,0.213557388818567,0.211931901159562,0,0,0,0.558350568994769,0.168776332241266,0,0.252433774244115,0.460249493211497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,1.39310378409594,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,3.54473944008842,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,1.30303176000821,1.02738161275192,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,1.24782516918484,1.07057393278297,0,1.17141414992713,0.902838299183157,0,0,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,1.06537035187876,1.06765302817952,0,0.116210378459959,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,1.62689197332152,8.3463219434655,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.580066775656914,0.170453254832202,0,0,0,0,0,0,0,0.6970372701606,0.308033580176089,1.06461206063404,0,0,0.143124886741991,0,0.316379424718726,0,1.27948895655667,0.42793898803392,1.27281299170375,0,0,0,0,0.202182481573316,3.17020642346017,0,0,0,0,0,0,2.26016233240486,0,0,0.438450885253763,1.15755106853338,0,0,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0.354761064070598,2.74439925886963,0,0.379473173765715,0,0,0,0,8.5670858706869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.10513566212459,0,0.306806047506464,0,1.55519793830904,0,0.179021174675609,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,1.99052386215701,5.66128412821371,1.83309043480088,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0.242780379534093,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.387956065953678,0,4.74559555639118,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.458320848023367,0,0.399358000997982,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0.236349546921671,0.329663433524666,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,2.7800931711549,0,0,0,0,0,0,2.17199840701485,0.864221491201268,1.30634944043764,0,0,0.170388021785422,0,5.8620893471233,1.32506888912221,0.258565912723101,0,0.684347351537318,0,0,0,0,0.496166021811951,0,0,0,12.5124094774979,22.0607106739976,17.1553522987538,9.83617892129413,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.597019211547496,0,1.10961172300523,0.947015026375446,1.0062716070103,6.22867855117575,0.228840068396924,1.20984739010591,0.15543720058278,0.443565449968902,0.159296767163702,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0,0.464033759878494,0.796191777397232,1.20008329398946,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.235479278551542,0.157115589916002,0.280272163313789,0,2.59113109462346,0,30.163101642549,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0.294450700845729,1.82876887473404,0,0.307988420568741,0,1.45713297917742,0,0,0,0,0,0,9.72394392160103,7.21246549663059,0,0.735444965261716,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,1.11598505450025,0.924351257262837,4.32626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,1.33064142618405,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| ||
|short_description=p3@RDH5 | |short_description=p3@RDH5 | ||
}} | }} |
Latest revision as of 08:01, 19 September 2015
Short description: | p3@RDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RDH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000548082_5end |
EntrezGene: | RDH5 |
HGNC: | 9940 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.66e-12 | 15 |
subcutaneous fat cell | 2.20e-09 | 3 |
outer root sheath cell | 6.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.20e-09 | 3 |
intestine | 3.21e-09 | 17 |
hypodermis | 3.32e-09 | 5 |
hair root sheath | 6.75e-07 | 2 |
hair outer root sheath | 6.75e-07 | 2 |
bulb of hair follicle | 6.75e-07 | 2 |
adipose tissue | 8.55e-07 | 14 |