FFCP PHASE1:Hg19::chr8:87111117..87111122,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:87111117..87111122,+
|short_description=p4@ATP6V0D2
|description=CAGE_peak_4_at_ATP6V0D2_5end
|association_with_transcript=-16bp_to_NM_152565,uc003ydp.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=245972 | |EntrezGene=245972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18266 | |HGNC=18266 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8Y2 | |UniProt=Q8N8Y2 | ||
|association_with_transcript=-16bp_to_NM_152565,uc003ydp.1_5end | |||
|cluster_id=chr8:87111117..87111122,+ | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_4_at_ATP6V0D2_5end | |||
|id=chr8:87111117..87111122,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.82e-11!65;CL:0000557!3.35e-11!71;CL:0002194!1.22e-10!63;CL:0000576!1.22e-10!63;CL:0000040!1.22e-10!63;CL:0000559!1.22e-10!63;CL:0000235!2.23e-10!10;CL:0000839!3.51e-10!70;CL:0000766!5.34e-09!76;CL:0000840!1.06e-07!5;CL:0001029!1.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.03e-75;6!CL:0000473;4.96e-14;39!CL:0000234;4.96e-14;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.24e-75,6;CL:0002194,5.45e-16,59;CL:0000576,5.45e-16,59;CL:0000040,5.45e-16,59;CL:0000559,5.45e-16,59;CL:0002009,1.92e-15,61;CL:0000839,3.24e-14,66;CL:0000557,5.43e-14,67;CL:0000766,5.79e-13,72;CL:0000473,2.59e-12,48;CL:0000234,2.59e-12,48;CL:0000763,2.47e-08,108;CL:0000049,2.47e-08,108;CL:0002087,9.14e-08,115;CL:0002031,2.12e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.30e-09!80;UBERON:0002405!1.34e-08!115;UBERON:0001474!2.31e-08!86;UBERON:0002390!8.35e-08!102;UBERON:0003061!8.35e-08!102;UBERON:0002193!2.36e-07!112;UBERON:0004765!3.35e-07!101;UBERON:0001434!3.35e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.33e-13;1!UBERON:0006518;1.33e-13;1!UBERON:0008949;1.33e-13;1!UBERON:0000101;1.33e-13;1!UBERON:0002167;1.33e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.61e-13,1;UBERON:0006518,1.61e-13,1;UBERON:0008949,1.61e-13,1;UBERON:0000101,1.61e-13,1;UBERON:0002167,1.61e-13,1;UBERON:0002371,3.09e-12,76;UBERON:0001474,2.81e-11,82;UBERON:0004765,3.41e-10,90;UBERON:0002405,7.79e-10,93;UBERON:0002390,2.77e-09,98;UBERON:0003061,2.77e-09,98;UBERON:0001434,4.44e-09,100;UBERON:0002193,2.47e-08,108 | |||
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| ||
|short_description=p4@ATP6V0D2 | |||
}} | }} |
Latest revision as of 08:11, 19 September 2015
Short description: | p4@ATP6V0D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP6V0D2_5end |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | -16bp_to_NM_152565, uc003ydp.1_5end |
EntrezGene: | ATP6V0D2 |
HGNC: | 18266 |
UniProt: | Q8N8Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.24e-75 | 6 |
monopoietic cell | 5.45e-16 | 59 |
monocyte | 5.45e-16 | 59 |
monoblast | 5.45e-16 | 59 |
promonocyte | 5.45e-16 | 59 |
macrophage dendritic cell progenitor | 1.92e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.24e-14 | 66 |
granulocyte monocyte progenitor cell | 5.43e-14 | 67 |
myeloid leukocyte | 5.79e-13 | 72 |
defensive cell | 2.59e-12 | 48 |
phagocyte | 2.59e-12 | 48 |
myeloid cell | 2.47e-08 | 108 |
common myeloid progenitor | 2.47e-08 | 108 |
nongranular leukocyte | 9.14e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.12e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.61e-13 | 1 |
right lung lobe | 1.61e-13 | 1 |
lower lobe of lung | 1.61e-13 | 1 |
lobe of lung | 1.61e-13 | 1 |
right lung | 1.61e-13 | 1 |
bone marrow | 3.09e-12 | 76 |
bone element | 2.81e-11 | 82 |
skeletal element | 3.41e-10 | 90 |
immune system | 7.79e-10 | 93 |
hematopoietic system | 2.77e-09 | 98 |
blood island | 2.77e-09 | 98 |
skeletal system | 4.44e-09 | 100 |
hemolymphoid system | 2.47e-08 | 108 |